Rhincodon typus (whale shark): 109924260
Help
Entry
109924260 CDS
T06055
Name
(RefSeq) vesicle-trafficking protein SEC22b-like
KO
K08517
vesicle transport protein SEC22
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
rtp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109924260
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109924260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109924260
Membrane trafficking [BR:
rtp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
109924260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF6236
Sec20
AMH_N
Motif
Other DBs
NCBI-GeneID:
109924260
NCBI-ProteinID:
XP_048472923
LinkDB
All DBs
Position
35:complement(17461243..17504455)
Genome browser
AA seq
213 aa
AA seq
DB search
MILMTMIARVADGLPLAASMQENEQSGRNLQEYQNQAKQLFRKLTEHSPTRCTLETGVLM
FHYLIDRGVCYLVLCEGNYSKKMAYAFLDDLQAEFSELYIKKVATVSRPYVFIEFDTYIQ
KLKKSYSDSWSRRKLGSINSELHDVQKIMVTNIEEVLQRGEALSALNTKASNLSTLSKKY
QQDAKELNSRSRFTKAATTGICLFMVMLYFWWL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgatgaccatgatcgcccgggtggcggacgggctgcctctcgccgcttccatg
caggagaatgagcagtcaggccggaacctacaggagtaccagaaccaggccaagcagctg
ttccggaagctgacggaacattctccgacccggtgcaccctggagacaggagtcctgatg
tttcactacctgatagaccggggcgtctgctacctggtgctgtgcgaggggaactactcc
aaaaagatggcctacgccttcctggatgacctgcaggcggagttcagcgagctgtatatc
aaaaaggtcgcgactgtctccagaccctatgtttttattgaattcgacacctacatccag
aagctgaagaagtcctacagtgactcctggtctcgccggaagctgggctccatcaacagc
gagctccatgacgtccagaagatcatggtgaccaatatcgaggaggtgctgcagcgaggg
gaggcgctctcggcgctcaacactaaagccagcaacctctccaccctctccaagaagtac
cagcaagatgccaaagagttgaactcccggtcacgcttcaccaaagcagcaaccacgggt
atctgcctctttatggtcatgctctacttctggtggttgtga
DBGET
integrated database retrieval system
