Rhincodon typus (whale shark): 109924484
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Entry
109924484 CDS
T06055
Name
(RefSeq) heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
KO
K07809
[heparan sulfate]-glucosamine 3-sulfotransferase 3 [EC:
2.8.2.30
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
109924484
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109924484
Enzymes [BR:
rtp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.30 [heparan sulfate]-glucosamine 3-sulfotransferase 3
109924484
Glycosyltransferases [BR:
rtp01003
]
Unclassified
Sulfotransferases
109924484
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
GPR15L
Sulfotransfer_2
NapD
Motif
Other DBs
NCBI-GeneID:
109924484
NCBI-ProteinID:
XP_048466818
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Position
23:complement(39832765..39974271)
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AA seq
379 aa
AA seq
DB search
MSVFGSEGWGVGAGSVSGRFLHRLLAMCSVLSFSLLCLSLLAARCHSLPPEARSQEAVCT
HQQPAQSTPSPDSTPRPGGQELWAGQDSAEPQQGSGAPEVTAMSPLIPANGTVKAGSRWW
GALRRLPEALIIGVKKGGTRALLEFMRLHPSVRALGAEPHFFDRHYGKGLQWYRNLMPKA
LDGQIVMEKTPRYFVTAEAPGRIHAMSKDTKLIVVVRDPVTRAVSDYTQIISKAPGIPGF
ETLTLKNRTTGLIDASWSPIWIGIYAQHLENWLQYFPLSQMHFVSGEKLISDPAGELGKV
QDFLGLQRMITDEHFFFNETKGFPCLKKPQGNGKPHCLGKTKGRIHPDIDPGVIEKLREF
YRPYNHHFYQMTGQNFGWE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtttggctccgagggatggggtgtaggagcgggcagcgtctcaggcaggttc
ctgcacagactgctcgccatgtgctccgtgctcagcttctccctgctctgcctgtcgctg
ctagccgcccgctgccactctctgccgccagaggccaggagccaggaggcggtctgcact
caccaacagccggcgcaaagcacccccagcccggacagtactccccggcccggcggccag
gagctctgggctggccaggacagcgcggagccacaacaaggcagcggagccccggaggtg
accgcgatgtctcctctcatcccggctaacggaacagtcaaggcgggcagccgctggtgg
ggcgctctccggcggctgcctgaagctctcatcatcggagtgaagaagggagggacccgg
gctctgctcgagttcatgcggctacacccgagtgtccgggcgctgggggctgagccacac
ttcttcgatagacactacggcaaagggcttcagtggtacaggaacctgatgcccaaagca
cttgatggtcagattgtgatggagaagacacccaggtattttgtgacagcagaggcccct
ggacgtattcacgctatgtctaaggacaccaagctgatcgtggttgtacgggacccagtg
actcgagctgtttcagactacacccagatcatctcaaaagcaccaggcatccctggattt
gaaacgctcactttaaaaaacaggactacaggcctgatagacgcgtcatggagcccaatc
tggattgggatctatgctcagcatttggagaactggctccagtatttccccttgtctcag
atgcactttgtcagtggggaaaagctgatcagtgatccagccggagagctgggaaaagtc
caggacttcctaggtctgcagagaatgataacagatgaacatttcttcttcaatgagacc
aaaggtttcccttgcttgaagaagccacagggcaatggcaaacctcactgccttggcaaa
acgaaaggccggatccatcccgacattgacccaggagtgatagaaaaactgcgggaattc
taccggccttacaaccaccatttctatcaaatgacagggcagaactttggctgggaatga
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