Rhincodon typus (whale shark): 109924518
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Entry
109924518 CDS
T06055
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109924518 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109924518 (nup62l)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109924518 (nup62l)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup49_C
Motif
Other DBs
NCBI-GeneID:
109924518
NCBI-ProteinID:
XP_048461057
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Position
14:complement(69646302..69693669)
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AA seq
596 aa
AA seq
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MSFNFGNPAGGGSFSFTAPKTGAGTGSAFSFGSTTAASQGAFSFGTPQQVTTTATSAPST
GLFSFSTPTTGVASSTGFCLPTQPATTATTGGFSLGVNKPSLGFGGTGCNPVSGFSFSNA
PATSTTTTTTCPALASVSAAQTTAPMGFSFGSNPTQPAVGGFGLGSCTTAQSTSSTGFGF
TSTLAAPTQTTAAGGFTFNAATNGTPTLTGFSFGTPATTAAPKPAAPLSLGAQSTGFAFG
ASTVASCANTSAPTTQGFSFNAKPAGTSTGISTAGPTLFASVVSSVPPATSATTGFPLSS
GTTPTLAAATTSPFGFKPTSTALPITTAASLASTSAAAATSNTGFSLGLKTPANFSLAPG
PAATAVSASTTATTTTAAVGTTATVTTATTTAPVTSSTPPVMSYAQLESLINKWSVELED
QEKQFLHQATQVNAWDRMLIENGEKITALHREAEKVKLDQKRLDQELDFILSQQKELEDL
LEPLEQSVKDQHGTIYLQHADEEREHTYKLAENIDAQLKRMAQDLKEIIQHLNTTSGSSE
ISDPLQQICKILNAHMDSLQWIDQSSVLLQKKVEDVSKQFEIRRREQERNCRITFD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaattttgggaatccggctggaggcggcagcttctccttcactgcccccaag
accggtgcaggcacagggagtgccttctcttttggcagcaccactgcagcctcccaaggg
gcatttagctttggaacaccccagcaggtcacaacaacggccacctcagcacccagcact
ggtctgttttcgttcagcacacccaccactggagtcgcatcatccactggattctgcctg
ccaacacagccagcaacaactgccaccactggaggcttctctcttggagtgaacaagcca
agtttagggtttggtggcacaggatgcaatccagtctctggcttctccttcagtaatgct
cctgctaccagcaccaccaccaccaccacttgtccagccttggcctctgtatcggcagct
cagaccacagcaccaatgggcttcagttttggcagcaatcccacacagccagctgtcgga
ggttttgggctggggtcctgtaccacagctcagtcaacatcttccactgggtttggattc
acctctaccctggctgccccaacccagactacagcagctggtggatttaccttcaatgca
gctaccaatggaacacccacgttaactggctttagctttggcaccccagcaactacagca
gctcccaaaccagcggcaccactctctttgggtgcacagtctacaggttttgcttttggt
gcgtctacagtggcgtcatgtgccaacacgtcagctcccacaacgcagggcttctcgttt
aatgcaaagccagcaggaacttcaactggtatatcaacagctgggccaactctgtttgcc
tcagtagtgagctcagtacctcctgccacttcagcgacaactggctttccattgagcagt
ggtaccactcctactcttgcggctgctacaacttctccatttggatttaaaccaaccagt
acagccttgcccatcacaacagctgcaagcctggcttccacctctgctgctgcagccacc
agcaacactggcttttctctggggctgaagacaccagcaaatttctccctggcgccaggg
cctgctgcaacagctgtcagtgcgagcaccacagctaccacaaccactgctgctgtgggc
actactgccaccgttactaccgccaccactactgctcccgttactagcagtactcctcca
gtaatgtcatatgctcagctggagagtctcatcaacaagtggagtgtggagctagaggac
caagagaaacaattccttcaccaggccacgcaggtcaatgcttgggaccggatgctaatc
gaaaatggtgagaagatcactgccttacaccgagaagcagagaaagtgaagctggaccag
aagagactggatcaagagcttgacttcatcctgtcacagcagaaggaactggaagacctg
ctggaaccactggagcaatccgtcaaggatcagcatggcaccatttacctgcagcatgct
gatgaagagcgagagcatacttataaactggcggagaatattgatgctcaactgaagagg
atggcccaagatctgaaggaaattatccaacatctcaataccaccagtggttcctcggag
atcagtgatccattgcaacaaatttgcaagattctcaatgcccacatggattctctacaa
tggattgaccagagttcagtgttgctgcagaagaaagtggaggatgtctcaaaacagttt
gaaatccgtcggagagagcaagagagaaactgcagaattacatttgactga
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integrated database retrieval system