Rhincodon typus (whale shark): 109924649
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Entry
109924649 CDS
T06055
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109924649 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109924649 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109924649 (yars1)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109924649 (yars1)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
109924649 (yars1)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
109924649 (yars1)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109924649 (yars1)
Prokaryotic type
109924649 (yars1)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109924649 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
109924649
NCBI-ProteinID:
XP_048469132
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All DBs
Position
27:19622871..20107217
Genome browser
AA seq
527 aa
AA seq
DB search
MGDSKNVQEKLNLITRNLQEVLGEDKLRSILEERDLSVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRTQYYEHVIKAMLESISVPIEKLRFVKG
TNYQLSREYTLDVYKLSSVVTQHDAKKAGAEVVKQVDHPLLSGLLYPGLQALDEEYLKVD
AQFGGIDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGGKMSSSEEESKIDLLDGKED
IKKKLKRAFCEPGNVENNGVLSFVKHVLFPLHGEFVILRDEKWGGCKTYVEYDELEKDFV
DQSVHPGDLKNSVEVGLNKLLDPIRKKFQMPEMQKLTRAAYPEPTKHQKGVSKGQAAEND
EIVPSRLDIRVGRIISIERHPDADSLYVEKVDVGEAQPRTVVSGLVQYVPIAELQNRDVI
LLCNLKPQKMRGIESQAMLLCASIEGEKRKVEPLNPPEGSSPGERVFIVGFENGAADDEL
KPKKKVFEKLQADFRISDDCIAQWQHKNFMTKLGIVTCKSLKGGNIS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtaagaatgttcaggaaaagctcaatctaatcaccaggaacttgcaggag
gtccttggtgaggataagttgcgttcaattctggaggaacgggatttgagtgtctactgg
gggacagctaccactgggaaacctcatgtggcatactttgtgccaatgtcaaagattgct
gatttcctaaaagctggatgtgaggtaactattctgtttgctgatttgcatgcctatttg
gacaacatgaaagctccctgggaactgctggaactgaggacgcagtattatgaacatgtc
ataaaagcaatgctcgaaagtatcagtgtgccaatagaaaaactcagatttgtaaaggga
actaattatcagttaagcagggaatacactttggatgtttacaaattatcctctgtggtg
actcagcatgatgccaaaaaagctggtgctgaagtagttaaacaagtggaccatccactc
ctcagtggtctcctatatcctggattacaggccttggatgaagaatacttgaaggtcgat
gcacagtttggtggaattgatcagaggaaaatattcacatttgcagaaaagtatcttcca
gctcttgggtacgccaaacgtattcacttgatgaatcctatggtgccaggtctgactgga
gggaaaatgagctcttctgaagaggaatccaaaattgacttgctggacggaaaggaagac
attaaaaagaagctgaaacgggcattctgtgaacctggtaatgtggagaacaatggtgtt
ttatcctttgtgaaacatgtcttgtttcccttacatggagagtttgttattttgagagat
gagaagtggggtggctgcaagacctacgtagagtatgatgaacttgaaaaagacttcgtt
gatcagtctgttcatcctggcgatctgaagaattctgttgaagttggcttgaacaaattg
ctggatccaattaggaagaagtttcaaatgccagagatgcagaaattaaccagagctgct
tatcctgaacctacaaagcatcaaaagggagtttccaaagggcaagctgctgaaaatgat
gaaattgtaccttcaaggcttgatataagagttggtagaattatcagtattgagagacat
cctgatgctgacagtctctatgtagagaaagtggatgttggagaagcacagccacgaaca
gttgtcagtggtttagtgcagtatgtccctatcgcggagctgcaaaatcgtgatgtcata
ttgttatgtaatttgaaaccacagaagatgcgaggaatcgaatctcaagccatgttgctt
tgtgcatcaatagaaggagaaaagcgtaaagtggagccattaaatcctccagaaggttct
tccccaggagagcgtgtgtttatagtaggatttgaaaatggtgcagcagatgatgaacta
aaaccaaaaaagaaggtgtttgaaaaattacaggctgatttcaggatctctgatgattgc
atagcccagtggcagcacaagaatttcatgaccaaacttggcattgtaacctgtaaatca
ctaaaaggcggaaatataagttag
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