KEGG   Rhincodon typus (whale shark): 109924676
Entry
109924676         CDS       T06055                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04145  Phagosome
rtp04148  Efferocytosis
rtp04310  Wnt signaling pathway
rtp04370  VEGF signaling pathway
rtp04510  Focal adhesion
rtp04520  Adherens junction
rtp04530  Tight junction
rtp04620  Toll-like receptor signaling pathway
rtp04810  Regulation of actin cytoskeleton
rtp05100  Bacterial invasion of epithelial cells
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109924676
   04310 Wnt signaling pathway
    109924676
   04370 VEGF signaling pathway
    109924676
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109924676
   04148 Efferocytosis
    109924676
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109924676
   04520 Adherens junction
    109924676
   04530 Tight junction
    109924676
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109924676
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109924676
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109924676
   05100 Bacterial invasion of epithelial cells
    109924676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109924676
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109924676
   04031 GTP-binding proteins [BR:rtp04031]
    109924676
Membrane trafficking [BR:rtp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    109924676
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    109924676
  Macropinocytosis
   Ras GTPases
    109924676
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    109924676
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109924676
  Exosomal proteins of other body fluids (saliva and urine)
   109924676
  Exosomal proteins of colorectal cancer cells
   109924676
  Exosomal proteins of bladder cancer cells
   109924676
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    109924676
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 109924676
NCBI-ProteinID: XP_048473269
LinkDB
Position
37:complement(11047870..11109789)
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLR
DDKDTIEKLKEKKLAPITYPQGLAMTKEIGSMRYLECSALTQRGLKTVFDEAIRAVLCPA
PEERKKKKCLLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccatcaaatgtgtggtggtgggggatggtgccgttggtaaaacctgtctgctg
atcagctacacgacaaatgcctttcctggagaatacatcccgaccgtattcgataactat
tccgccaacgtgatggtcgatggtaagccagtgaacctggggctatgggatacagctgga
caagaggattatgatcgtctccggccactgtcctacccacagaccgacgttttcttgatc
tgcttttcattggtcagccccgcgtcgttcgaaaatgttcgcgccaagtggtatcctgag
gtgcggcatcactgtcccagtactcccatcatcctggtaggcaccaaactggatctgagg
gacgataaagacaccattgagaaactgaaggagaagaagttggcacccatcacctaccca
caaggacttgctatgacaaaggagattggttcgatgcgatacctcgagtgctcagccctc
acacagagaggtctgaagactgtgttcgatgaggccattcgcgctgtgctgtgcccggct
cctgaggagaggaaaaagaagaaatgtctgctactgtag

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