Rhincodon typus (whale shark): 109924919
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Entry
109924919 CDS
T06055
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109924919
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Gene cluster
GFIT
Motif
Pfam:
DUF4209
SLR1-BP
TPR_28
Motif
Other DBs
NCBI-GeneID:
109924919
NCBI-ProteinID:
XP_048457332
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All DBs
Position
9:complement(82739712..82784561)
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AA seq
507 aa
AA seq
DB search
MATFEHIKTCLSAEVHHMVCSLGLTVLNRPELERIITVSGEICWEAITFYLHTSDAEKHD
LDYIESVRSLGPVCKTVHLYLLSLSTQHFNNQYGLWFKWTNNRELFVEAFEAIRSAQPTA
VSLSLMKLTACLERALGDGHCLKFLQPENSHFCLCNFCFAFPQSTTLYTTFDEMLAKYLD
NGVINHLPSALGDPIMEILWDLLNHQEGPRLRDHLSHGEIDLKLFPREMASHVVALAIIL
LHHCHRGANGIAMENECLRTIMCSTHLYCSRFHPVGRLKQQLRRCLESLQKWGEIPRPTL
EQASDRPGSDCLSPAAQTVHRCLMEGLVSALINRLKMVYDEDLNPFHYLLAEAQLHLVAK
LLANRIGTLYCSRVVLELVSLLRKITSQCLTVSEQIMHGAVSRHQQWLSKSLRSRQRQNY
LRMLGSVQYLHHIFSLLTLLVAVELLNAQTMVDETSSEYHRHLKFLKSVLQYTENMVTYT
SPDKNKWNESWDLTEKMLLKVKNFYNK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatttgagcatataaagacctgcctttcagcagaagtacatcatatggtctgc
agtcttggactgacggtgttgaataggccagagcttgagcgcatcatcactgtatctgga
gagatttgctgggaggctattacattttacctacacacttcagatgcagagaaacatgac
ctggactacatagaaagtgtgagaagtctgggacctgtatgtaaaactgtccatttatat
ctactgtcactcagtacacagcacttcaacaatcaatatggactgtggtttaaatggact
aacaacagagagttgtttgttgaagcatttgaagccatcaggagtgcacaacccaccgct
gtatccctcagcttgatgaagttaacagcttgtctagaacgagctttgggtgatggacat
tgcctaaagttcttacaaccagaaaattcacatttttgtttatgtaatttctgttttgct
tttccacagtccacaacactatacacaacatttgatgagatgctggcaaaatatctagac
aacggtgttataaaccaccttccttcagctttgggagatcctataatggaaattctctgg
gacctgttaaaccaccaggagggtccacggctccgggatcacctaagtcacggtgaaata
gacttgaagttgtttccaagagaaatggctagtcacgtcgtggcacttgctatcattttg
ttacatcattgtcatagaggggcaaatggaattgctatggaaaacgagtgtctgagaaca
attatgtgttctacgcatttatattgctctcggttccatccagttggacggcttaaacaa
cagcttcgacgctgccttgaaagcctccagaaatggggtgagataccaagacccacactg
gaacaagcatcggatagacctgggtctgattgtttgagtcctgcagcccaaactgttcac
cgatgcctgatggaaggacttgtttctgcactaataaaccgattgaagatggtttatgat
gaagaccttaatccttttcattatttgttggcagaggcgcagcttcatctggtagctaaa
ctgctggccaaccgcatcggcactttgtattgctcacgtgttgttttggaattggtgtcg
ttgctgagaaaaattacctcgcaatgcctgactgtttcagagcagattatgcatggtgct
gtgtctcgccaccaacagtggctgagcaaatctctgcgctcacggcaaaggcagaattat
cttcgaatgctgggcagtgtccagtacttgcaccacattttcagtctacttactctactt
gtagcagtggaactgcttaatgcacagacaatggtggatgagacttcttctgaatatcac
cgccacttgaagtttctgaagtcggtgttgcaatacacggaaaatatggtcacgtacaca
agcccagacaaaaataaatggaacgagagctgggatctgacagagaaaatgttattgaaa
gttaaaaatttttacaacaaatga
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