Rhincodon typus (whale shark): 109924948
Help
Entry
109924948 CDS
T06055
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109924948 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109924948 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109924948 (vps28)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
109924948 (vps28)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109924948 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
109924948 (vps28)
Exosomal proteins of colorectal cancer cells
109924948 (vps28)
Exosomal proteins of bladder cancer cells
109924948 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
AAA_12
BsaP
Motif
Other DBs
NCBI-GeneID:
109924948
NCBI-ProteinID:
XP_020380510
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MFQGIAANPAGGGQGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKTYIKDC
VTPTEYTAACSRLLVQYKAAFKQVQGSDISTIDEFCRRYRLDCPLAMERIREDRPITIKD
DKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNLPADFEGKEKV
GQWLQKLSGMSASDELDDTQVRQMLFDLESAYNSFNRFLHSS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaggcatcgctgcaaatcctgctggtggaggtcaagggaacaagccagaactg
tacgaggaagtcaagttatacaaaaatgccagggagcgggaaaagtatgataacatggct
gaactgtttgctgtggtgaagacattgcaggcactggagaaaacctacatcaaggattgt
gtcactccaactgagtacacagcggcctgctcacgcctgctggttcaatacaaagcagca
tttaaacaggtccagggctctgatatcagcaccatcgatgagttctgtagaagatacagg
ctggattgtccattggcaatggaaaggattagggaggatcgtccaatcacaatcaaggat
gacaagggcaatttgaaccgctgtattgctgatattgtgtcgctcttcataactgtcatg
gataaactccgtcttgagatccgagccatggatgagatccagcccgatctccgggagcta
atggaaaccatgaatcggatgagtaatctgccagcggattttgaaggaaaggagaaagtt
ggccagtggttacagaagctcagtggaatgtcagcttcagatgaattggatgacacccag
gtgcgacagatgctgtttgacttggagtctgcctataactcattcaacaggttcctgcat
tcttcttaa
DBGET
integrated database retrieval system
