Rhincodon typus (whale shark): 109925047
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Entry
109925047 CDS
T06055
Name
(RefSeq) host cell factor 1-like
Organism
rtp
Rhincodon typus (whale shark)
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Gene cluster
GFIT
Motif
Pfam:
fn3
Motif
Other DBs
NCBI-GeneID:
109925047
NCBI-ProteinID:
XP_020380617
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Position
44:complement(379518..399383)
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AA seq
949 aa
AA seq
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MQISSLGKMVSLVQTKPVQSGVVTGQATSSPVTQYIQTKGPLPPGATILKLVTSADGKPT
TIITTTQAGGTVATKPPTILGISSMSANTSNKPGTTTIIKTIPVSALMAQQGAAAVTSNT
GMKSPITIFTTKVMTPGTSSPAKIITAVPKISGGTGQQGLTQVLLKGAPGQPGTILRTVP
VSGMRLVTPVSVSAVKPAVTTLVVKSTTGVTTLGTVTGSLGGTAGVGAATTLAGTLGTFS
SQLINSAVITVSAAQPGLTTSSTPSVAMQAPSEPTRVTLITAPTGVETSSIQELPITILA
SPTMEQPSLVHVPESGQAECQASGSPPLVCSNPPHETSETNTTNTATTVTANMDANQVQP
PPTNAQGLPETVHGETATAGTTNTATTVSAAQTGANTTVTQSTPTPSPSIPGVARISEGT
NVTTSMEQPSPSTGEQPVAPDTVAGPPPATGEDAAPPGPTAETGTPLQTGEGTGAEQLAP
PQELMADAMAGQSDLAGLTPEELAVTAAAEAAEQAAVSQEVQALALQAVLQAAQQAAMGS
GETIEMPDPKQQPHETDLAQLSAVSADAQQAALPLAVLAHQDLAALVQQQQQQQQQQQQQ
QQQQQQQQQHLLSAGPSQPQLPTEALAPADSLNDPTGETNGLGELGVPTNSVGTHPLLPP
TTTEGLAPSSSLASPQPVSVVSPSKLQAATTLAEVANGIEPSSTVKGDTSSVTPKPAVKK
DLNQWLDVGVIKGTTTVVTHYHLPPDGLPARDDDSAPIPDHSQLKRQELQSGTAYKFRVA
GINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSMTSGKIIEYSVYL
AIQSTQSMELKPNSPAQLAFMRVYCGPNPSCLVQSANLSNAHIDYTTKPAIIFRIAARNE
KGYGPATQVRWLQETNKDGSVVKPAVKRSISSPETKSSNMPKKTKADGQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctccagcctggggaagatggtctccctggttcaaaccaagccagtgcagtcg
ggagtggtcacgggtcaagcgacgtccagccccgtcacacagtacattcagaccaaaggc
ccgctcccccctggggcgaccatcctgaagctggtgacgtcagccgatggcaagccgacc
accatcatcaccacgacgcaggccggagggacggtggccaccaagccacccaccatcctg
ggcatcagcagcatgtctgccaacaccagcaacaaaccgggcaccactaccatcatcaaa
actatccctgtttcagccctcatggctcagcagggggcagcagcggtcacaagcaacacc
ggcatgaagtctccgatcaccatcttcaccaccaaagtgatgacgccaggcaccagcagc
cctgccaagatcatcaccgctgtgccaaagatcagtggaggaacgggccaacaggggctg
acacaggtattactgaagggagcccctgggcagccaggcaccatcctgcgcactgtcccg
gtcagtggcatgcggttagtaacaccggtatctgtctcggccgtgaaaccagctgtcacc
accctggtggtcaagagcacgacaggtgtgaccaccctgggcacggtgacgggatccctt
ggagggacagcgggggtgggcgccgccaccaccctggctggcaccctgggcaccttctcc
agccagctgatcaattctgcggtcatcaccgtgtccgccgctcagcccggcctcaccacg
agcagtacgccatctgtcgccatgcaggcgccgtcagaacccacacgggtcacgttaatc
actgcacccaccggggtggagacgtcgtcgatccaggagttgcccatcactatccttgcc
tcccccaccatggagcagccctcgctggtgcacgtgcccgagagcgggcaggctgagtgc
caggcgtctgggagcccgcccttggtctgctccaaccctccccacgagacgtctgaaacc
aacaccaccaacactgccacgacggtcactgccaacatggatgccaaccaggtccagcct
ccgcccactaacgcgcagggcctcccggagaccgtgcacggggaaacggccacagcaggt
acaaccaacacagcaaccacggtgtctgctgcacagacaggggccaacaccacagtgaca
cagtcaaccccgacacccagcccctccatcccgggtgtggcgaggatatcggaaggcacg
aacgtcacaacgtcgatggaacagcccagcccctcgactggtgaacagcctgtggccccg
gacacagtcgctgggcccccgccagctacaggggaggatgctgcaccacctgggcccacc
gcagagactggcacccccctgcagaccggcgagggcacaggagccgagcagctggcaccc
cctcaggagctgatggcggacgcgatggccgggcagagcgatctggcgggcctgacacca
gaggagctggcagtgaccgcggccgcggaggcagcggaacaggcggctgtctctcaggag
gtgcaggccctcgccctgcaggccgtgttgcaggctgcacagcaagctgccatgggttct
ggggaaacgatcgagatgccggacccaaagcagcaaccacacgagacggatttggcccag
ctgagcgcagtgtccgccgatgcccagcaggcagcgctcccgcttgccgtgctcgctcac
caagatctggcggcgctagtccagcagcagcagcagcagcagcaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacatctcctgtctgctgggcctagccagccccag
ctacccactgaagccctggcgcccgctgacagcctcaacgaccctacgggcgagaccaat
gggctcggtgagctcggtgtgcctaccaacagcgtgggcacccacccgctcctccccccg
accaccaccgagggcctggcaccgtccagctctcttgcttccccgcagccagtctccgtg
gtgagtcccagcaagcttcaggcagccacgacgctcgcagaggtagccaatgggattgag
ccctcctcgactgtgaaaggggacacgtcctccgtcactccgaaacccgctgtcaagaag
gatctgaaccagtggctcgatgttggggtgatcaagggcacaacaaccgtggtgacccac
tatcacttgccgccagacggtttgcctgccagagacgatgattccgcaccgatcccagac
cacagccagctgaaacggcaggagctccagtcgggcaccgcctacaaatttcgggtggcg
ggcatcaatgcctgcgggcgaggaccgttcagtgagatctccgccttcaagacctgtttg
ccaggcttcccgggggctccttgtgccattaaaataagcaagagtccagatggggcccac
ctgacgtgggagcccccctccatgacatcggggaagattatcgagtactctgtgtacctt
gccatccagagtacccagtcgatggagctgaagcccaacagcccggcgcagttggccttt
atgagagtgtactgtggccccaacccttcgtgcctggtccagtcggccaacctgtccaac
gctcacattgattacaccaccaaacctgcaatcatcttcaggatagcagctcgaaacgag
aaggggtatggaccggccacacaggtcaggtggctccaggaaaccaacaaagatggttca
gtggtgaaaccagcggtgaagcgatccatcagctccccagaaacgaaatcatcgaacatg
cccaagaagacgaaagcggacggccagtga
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