KEGG   Rhincodon typus (whale shark): 109925048
Entry
109925048         CDS       T06055                                 
Name
(RefSeq) ras-related protein Rab-7a-like
  KO
K07897  Ras-related protein Rab-7A
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04137  Mitophagy - animal
rtp04140  Autophagy - animal
rtp04144  Endocytosis
rtp04145  Phagosome
rtp04148  Efferocytosis
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109925048
   04145 Phagosome
    109925048
   04140 Autophagy - animal
    109925048
   04137 Mitophagy - animal
    109925048
   04148 Efferocytosis
    109925048
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109925048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109925048
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109925048
   04031 GTP-binding proteins [BR:rtp04031]
    109925048
Membrane trafficking [BR:rtp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    109925048
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109925048
  Exosomal proteins of other body fluids (saliva and urine)
   109925048
  Exosomal proteins of colorectal cancer cells
   109925048
  Exosomal proteins of bladder cancer cells
   109925048
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    109925048
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA AAA_16 SRPRB AAA_7 AAA_22 PduV-EutP ABC_tran AAA_24 TniB nSTAND3 AAA_29 Septin HdrB-like_C nSTAND1 DUF815 MCM AAA_14 AAA_5 NACHT FeoB_N ATPase_2 DAP3
Other DBs
NCBI-GeneID: 109925048
NCBI-ProteinID: XP_048475775
LinkDB
Position
44:336821..378498
AA seq 204 aa
MTTPVHLKVVLLGDSGVGKSSLMNQYVNKHYTNQYKATIGVDFLNRNITVDGKNVCVQLW
DTAGTERFHSLGSFLYRAADCCVLVFDVTSEASFKALDSWRKEFLLQADPRDPDNFPFLV
VGNKADLSGSREVISKLAENWCSAHRLKYIETSAKDALNVEEAFQDGVRLALKRLRREDQ
IADQFDQVQLMPEEDRQRNACACG
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacgacgcctgttcacctgaaggttgtccttctgggcgattctggggtggggaaatca
tccctcatgaaccaatacgtgaacaagcattacaccaatcagtacaaggcgactattgga
gtggatttcctcaaccgtaacatcactgtcgacggcaaaaacgtgtgtgtgcagctctgg
gacacagctggcactgagcgtttccattcgctgggctctttcctgtatagggccgcggat
tgctgtgtattggtgtttgatgtgacctcagaggcctccttcaaggcactggatagctgg
cgaaaggagttcctgctccaggctgaccccagggatccagacaactttccattcctcgtc
gttgggaacaaggctgacctgagcggcagcagagaggttatctcaaagctggcagagaat
tggtgcagtgcgcaccgtctgaagtacatcgagaccagtgccaaggatgcgctgaacgtg
gaggaggcatttcaagatggcgtacggctcgctttgaagcggctgagaagggaggaccag
attgcggaccaatttgaccaggttcagctgatgccagaggaagacagacagcggaacgcc
tgtgcttgtggctga

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