Rhincodon typus (whale shark): 109925115
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Entry
109925115 CDS
T06055
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109925115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109925115
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Transforming growth factors (RSTK binding)
109925115
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
RE_HaeIII
Motif
Other DBs
NCBI-GeneID:
109925115
NCBI-ProteinID:
XP_048453342
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Position
5:8326509..8337223
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AA seq
370 aa
AA seq
DB search
MVNSWMMLSFGILFGCVLWSALADGVHQYHHVEEVKAAMLRKLALTEAPHLIKRDLENAV
VPARVRNKYVSMLKLYKDKERKRRALPSLAGILRGVPGNSDTRGDILYSDPARQTLVFDM
KGLIPENSEVTMAELKLFKKSVHKGELPPRRHSRPVNNARVSVHWVKTLPDGSNRTSLID
SRLVPILDFGWKMFDVTQAVHYWQNTKEIAMYLEVWIEAERPGRHAAELARFVSFTSQDP
ADQELAKPELVLYTLNFSEYGAAGDCSGSRTRRSGSCCRQEYFINFRELAWTQYWIIEPP
GYQAFHCVGSCKQPQWPFDYGERSCAAVESASLPVMYLVKKGDYTEIEVAEFPNMITEKC
GCTMDNISMI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacagctggatgatgttatcctttggaatcctcttcggctgtgtcctgtggtca
gcgctggctgatggggtccaccaataccatcatgttgaggaggtcaaggctgctatgctc
aggaaactggcactgaccgaggctccacacctcatcaagagagacctagagaacgcagtg
gtgccagctcgtgtgaggaacaaatacgtctccatgctgaagctctacaaggacaaggag
aggaagaggagagccctgcccagcttggctggcatcttacggggagtgccaggaaattcc
gatacgagaggagacatactctattcggaccctgccaggcagacgctggtcttcgatatg
aaggggctgatccctgaaaacagcgaggtgaccatggcagagctcaagctcttcaagaaa
agcgttcacaaaggagagctccctcccaggaggcacagtcggccagtcaacaacgccagg
gtcagtgtgcactgggtcaagactctgcctgatggcagcaacaggacctcactcatcgac
tctaggctggtccccattctcgactttggctggaaaatgttcgatgtcacccaggctgta
cactactggcagaataccaaagagattgcaatgtacttagaggtctggattgaagctgag
cgaccggggaggcacgcggctgagctggccaggttcgtctccttcacctcccaggatcct
gctgaccaggagctggcaaagcctgagctggtcctctacaccctcaacttcagcgagtac
ggagctgccggggactgcagtgggagccggacccgaagaagtggatcctgctgcaggcag
gaatacttcatcaacttcagggagctggcctggacgcagtactggatcatcgagccccct
ggttaccaggccttccactgtgtgggcagttgcaagcagccacagtggccctttgactat
ggagagaggagctgcgcagcggtggagagtgcctccctgcctgtgatgtacctggtgaag
aaaggggactacacagagatcgaagtggctgaattccccaacatgatcactgagaagtgt
ggctgcactatggacaatatctcaatgatataa
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