Rhincodon typus (whale shark): 109925288
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Entry
109925288 CDS
T06055
Name
(RefSeq) ras-related protein Rab-5B isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04137
Mitophagy - animal
rtp04144
Endocytosis
rtp04145
Phagosome
rtp04148
Efferocytosis
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109925288
04145 Phagosome
109925288
04137 Mitophagy - animal
109925288
04148 Efferocytosis
109925288
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109925288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109925288
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109925288
04031 GTP-binding proteins [BR:
rtp04031
]
109925288
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
109925288
Endosome - Lysosome transport
109925288
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109925288
Exosomal proteins of other body fluids (saliva and urine)
109925288
Exosomal proteins of colorectal cancer cells
109925288
Exosomal proteins of melanoma cells
109925288
GTP-binding proteins [BR:
rtp04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
109925288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
109925288
NCBI-ProteinID:
XP_048474857
LinkDB
All DBs
Position
41:5838888..5860846
Genome browser
AA seq
215 aa
AA seq
DB search
MAGRGVSRPNGQSQTSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLANKRMVEYAEAQGYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKTELQNTSGTTGRNRGVDLHEPSQQSKSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagaggagtatccaggccaaatggtcagtcccaaaccagcaaaatatgccaa
tttaaacttgtattactaggagagtcagctgtgggcaaatctagtcttgtgctacgtttt
gttaaaggacaattccatgaataccaggaaagcacaattggtgctgcatttctgacacaa
tctgtctgcttggatgacacaacagtaaagtttgagatctgggacactgctggacaggag
cggtatcacagtttagctcccatgtactacagaggtgctcaagctgccattgtggtttat
gacatcaccaatcaggaaacctttgcaagagcaaagacatgggtaaaagagttgcagcga
caagcaagtcccaatatagttatagccctgtcgggaaacaaagctgatctggctaataaa
aggatggtggaatatgcggaagcacaaggatatgcagatgataatagtttgttgttcatg
gagacatcagccaaaacagcaatgaatgttaatgacctatttttagcaatagccaagaag
ctgccaaagactgaacttcagaataccagcggaaccactggtcgcaacagaggtgtggat
ctccatgaaccgtctcagcagagcaagagccagtgttgtagcaactaa
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integrated database retrieval system
