Rhincodon typus (whale shark): 109925516
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Entry
109925516 CDS
T06055
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03320
PPAR signaling pathway
rtp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109925516
03320 PPAR signaling pathway
109925516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109925516
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtp03310
]
109925516
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109925516
Nuclear receptors [BR:
rtp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109925516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
109925516
NCBI-ProteinID:
XP_048477467
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MNSPPPHSTVNSMVGHHSMIGSSVNASRSLSSSMGSLASPVNGLGSPYPVITSSIGSPSV
TLPSTPGISYGALSNPQINAVNSVSSTEDIKPPPGLSGLGNMNCYSPNSIAKHICAICGD
RSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDTKDCIIDKRQRNRCQYCRYQKCLATGM
KREAVQEERQRGKERSDNELEPSSSVNDDMPVEKILEAELAVEPKTETYVDASAGNSVCN
ADSLPTVFLLNSNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELL
IASFSHRSISVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGC
LRAIVLFNPDAKGLSNPGEVESLREKVYASLEAFTKHKYPDQPGRFAKLLLRLPALRSIG
LKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccctcccccgcactctacagtgaactcaatggttggccatcattcaatgatc
ggctcctcagtgaatgcgtcacgatctctcagttcctccatggggagcttggcttccccg
gtgaatggattgggatctccgtatccagtcatcacctcgtcaataggctccccctcggtg
accctaccgtcaactcccggcatcagctacggagcactcagcaacccccagatcaacgca
gtcaacagtgtcagtagtacagaggacattaagccaccaccgggcctcagtggacttgga
aacatgaactgttacagcccaaactcaattgctaaacacatctgtgcgatatgtggagat
cgatcctcaggaaagcattacggggtgtatagctgtgagggctgtaaaggcttcttcaaa
cggactgtgcgcaaggaccttacctacacttgtcgtgacaccaaagactgcatcatcgac
aaacggcaacgcaatcgttgccagtactgtcgctaccagaaatgcctggccacggggatg
aaaagggaagccgttcaagaggaaaggcagcgggggaaggagcgaagtgacaacgagctg
gagcccagcagcagcgtcaatgacgacatgccagtggagaaaattttagaagcggaacta
gctgtggagccaaagacagagacatacgtggatgccagtgcaggaaattcggtgtgtaat
gcagattcccttccaactgtctttctgcttaactccaacgacccagtcaccaacatttgc
caagccgcagataagcagctcttcacactggtcgaatgggccaagaggatcccgcatttc
tccgatctccccctcgacgatcaagtcattctcctccgggcaggctggaacgagctactc
attgcttcattctcacatcgttcgatctccgtgaaggatggcatcctcctagctacaggg
ttgcacgtccatcgcagcagtgcccacagtgcgggcgtgggctctatattcgacagagtt
ctgacggaattagtttcaaaaatgaaagatatgcagatggacaagactgagttggggtgt
ctgagggccatcgttctcttcaatccagatgcgaaaggtttatcgaacccaggagaagtc
gaatctctgagagaaaaagtatatgcatcgctagaagcttttacaaaacacaaataccct
gaccagcctggcaggtttgcgaagctgctcctgcgactcccagcccttcgatcgattggg
ctcaagtgtctcgagcacctcttcttcttcaagctgattggagacacccccatcgacacc
ttcctcatggagatgctggaggccccacaccaaatgacatga
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