Rhincodon typus (whale shark): 109925524
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Entry
109925524 CDS
T06055
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109925524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109925524
03036 Chromosome and associated proteins [BR:
rtp03036
]
109925524
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109925524
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109925524
PBAF complex
109925524
GBAF(ncBAF) complex
109925524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109925524
NCBI-ProteinID:
XP_048449565
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MCGGGNSLVVLTLNCYDADKRELQMPAKRRKMSDKILPQRIRELVPESQAYMDLLAFERK
LDQTIMRKRVDIQEALKRPIKQKRKLRLYISNTFNPARSETEDSDSSIASWELRVEGKLL
EDVSGLDKQQEIXSGEYVCVVLLQWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPP
QFKLDPRLARLLGIHTQTRSAIVQALWQYIKTNKLQDCHDKEYISCDKYFQQIFDGPRLK
FSEIPQRLTTLLLPPDPIIINHLISVDPNDQKKTACYDIDVEVDDPLKGQMSSFLLSTAN
QQEIAALDNKIHETIESINQLKIQRDFMLSFSKDPEGYIQDWLRSQSRDLKIMTDVVGNP
EDERRADFYQQPWSQEAVSRYFYCKIQQRRQELEQAMGVRNT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaggaggtaatagcctggtggttttaacactgaactgttacgatgcagacaaa
agagaactgcagatgcccgccaagagacggaagatgtcagacaagatcctaccgcagagg
atccgggagctggtccccgaatcccaggcctacatggacctcctggccttcgagaggaaa
ctcgatcaaaccatcatgaggaagagagtggacatacaggaggctctgaaaagaccaatc
aagcaaaagcggaagttgaggctctacatctcgaacaccttcaacccggctcggagtgag
actgaagactccgacagtagcatcgcctcctgggaactccgagtggagggaaagctcctc
gaggatgtgagtggtctggacaagcagcaggagatttgaagtggtgaatatgtgtgtgtg
gttcttctgcagtggcaccggacccccacaacccaggagaccgatggcttccaggtgaag
agaccgggtgatgtcagtgtgcggtgtacattgttgctcatgcttgactaccagccgccc
cagtttaagttggaccctcggttggcacgcttactaggaattcacactcagactcgatcg
gccatcgtacaggctctgtggcagtacatcaaaaccaacaaactacaggactgtcatgac
aaggagtacatcagctgtgacaagtacttccagcagatatttgatggtccccggttaaag
ttctctgagattccccagagactgaccaccttgctgctccctccagatccaatcatcatc
aaccacctcatcagtgtggatccaaacgatcaaaagaaaacagcctgttatgatatcgat
gtggaggtcgatgaccctctgaaaggtcagatgagcagtttcctgctctctacagccaat
cagcaggagattgctgcactcgataacaagatccacgagacgatcgaatccatcaaccag
ctgaagattcagagagacttcatgctgagtttctccaaggacccagagggctacattcaa
gactggctgagatcccagagtcgtgacctgaagatcatgacggatgtggttgggaatcca
gaggacgagcgacgagctgatttttatcagcaaccgtggtcacaggaagctgtcagcaga
tacttctactgcaagatacaacagcggagacaggaactggagcaagccatgggagtgcgc
aacacctaa
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integrated database retrieval system
