Rhincodon typus (whale shark): 109925669 Help Entry 109925669         CDS       T06055                                  Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism rtp  Rhincodon typus (whale shark) Pathway rtp04510   Focal adhesion rtp04517   IgSF CAM signaling rtp04518   Integrin signaling rtp04519   Cadherin signaling rtp04520   Adherens junction rtp04530   Tight junction rtp04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:rtp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     109925669    04518 Integrin signaling     109925669    04519 Cadherin signaling     109925669  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109925669    04520 Adherens junction     109925669    04530 Tight junction     109925669   09142 Cell motility    04810 Regulation of actin cytoskeleton     109925669  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rtp04131]     109925669   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:rtp04812]     109925669    04147 Exosome [BR:rtp04147]     109925669 Membrane trafficking [BR:rtp04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     109925669 Cytoskeleton proteins [BR:rtp04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      109925669 Exosome [BR:rtp04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    109925669   Exosomal proteins of colorectal cancer cells    109925669   Exosomal proteins of bladder cancer cells    109925669 SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_6 EF-hand_1 EF-hand_7 XisI EF-hand_8 Ice1_1st Motif Other DBs NCBI-GeneID:  109925669 NCBI-ProteinID:  XP_048474111 LinkDB All DBs Position 39:complement(3356332..3404894) Genome browser AA seq 827 aa AA seqDB search MLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLG MIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHR HRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSCF YHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRQTKPWLENREPEKT MQAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIN NAWQGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKATIHEDWTKDKEAMLTQKDYETA TLADIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNDLDYYDSPNVNARCQTICDHWDT LGSLTQSRRDALERTEKLQETIDQLYLEYAKRAAPFNNWMEGAMEDLQDMFIVHTTEEIQ GLIAAHEQFKATLPDADKEREAILGIHNEMMKIAQSYNIKLSGVNPYTSITSQSINDKWD KVQQFVPARDQALQAEFNKQQSNEHLREQFANKANVVGPWIQTKMQEIGRISIEMHGTLE DQLNQLKQYESSIINYKPNIEKLEQDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIA RTINEIENQILTRDAKGISQDQLNEFRSSFNHFDKDHTGKLGPEEFKACLISLGYDVGND QQGEAEFARIMSIVAPNNTEEVSFQAFIDFMSRETTDTDTAEQVMASFKILAGDKSYITA EELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL NT seq 2484 nt NT seq  +upstreamnt  +downstreamnt atgctactactggaggtgatttcaggagagcgattacctaaaccagagcgtggaaaaatg agggtgcataaaataaacaatgtcaataaagcgttggatttcattgcatccaaaggagta aaacttgtgtccattggggcagaagaaattgtggacgggaacgttaagatgactctaggt atgatctggactatcatacttcgttttgctattcaagacatatctgttgaggagacctct gccaaggagggattgctgctgtggtgccagagaaagactgcaccgtacaagaatgtaaat gtgcagaacttccacatcagttggaaggatggtttggcattcaacgcactcatccataga cacagaccagaacttatcgattacgataagctgaggaaggatgatccactgacaaacttg aacaatgcctttgaagtggctgagaagtacctggatatacccaagatgttggatgcagag gacattgtgaacaccgctcgccctgatgagaaggctattatgacctatgtctcctgcttc taccatgccttttcaggagcacagaaggctgagactgcagccaataggatttgcaaagtc ctggcagtaaaccaagaaaatgaacatctgatggaggattatgaaaaactggccagtgat ttgctggagtggatccgtcaaaccaaaccctggttagagaacagagagcctgagaaaaca atgcaagctatgcagcaaaaactggaagactttcgtgattaccgccgtgtccacaaacct cccaaagtgcaggagaagtgccagcttgagatcaacttcaacaccttgcagaccaaactc cgactcagcaatcgaccagctttcatgccatctgaagggaaaatggtctcggatattaat aatgcatggcaagggctggagcaggcggagaagggctatgaggaatggctgctgaatgag ataaggagactggaaagacttgatcatttggcagaaaagttcaggcagaaagccaccatt catgaagattggaccaaagataaagaggcaatgttgacacagaaagactatgaaacagct acgctggctgacattaaagccttgctgaagaaacatgaggcatttgagagtgatctggca gctcaccaagacagagtggagcagattgctgctattgcacaagaactcaatgacctggat tattatgattctcccaatgtaaatgcacgctgccagactatctgtgaccattgggatact ctgggctctttgacacagagcaggagggatgccctagagaggactgaaaaactgcaggaa acaattgatcagttatacctggaatatgccaaaagagctgcacctttcaataactggatg gagggagcgatggaagatttgcaagacatgtttatcgtccataccactgaggagatccag ggtctcattgcagcacatgaacaattcaaagcaacattgccagatgctgacaaagagcga gaggccatcctgggcatccataatgaaatgatgaagattgctcagtcctataatatcaaa ttatctggtgtaaatccatacacatctatcacttcacagagtattaatgataaatgggat aaggttcaacagttcgtgccagcgcgggaccaagccttgcaagcagaatttaacaagcaa cagtccaacgaacacctgcgtgagcagtttgcaaataaggctaatgttgttggaccctgg attcagacaaaaatgcaggaaattggtcggatttctattgaaatgcatggcacattggaa gaccaactaaatcaactgaagcagtatgagagcagtatcatcaattacaaaccaaacatt gagaaattggagcaggatcaccagctcatccaggaggcgctcatctttgataacaagcac accaactataccatggagcacatccgagttggctgggaacagctgttgaccacaattgcc agaaccatcaatgaaatagaaaaccaaatcctcacccgtgatgcaaaaggcatcagccag gatcaactgaatgagttccgatcatcatttaatcactttgacaaggaccataccgggaaa ctgggacctgaagaatttaaagcctgccttatcagcttgggctacgatgttggaaatgac cagcagggtgaagcggagtttgcacgaataatgagtattgttgcccccaacaacactgaa gaagtgtcattccaagcctttattgacttcatgtcacgtgagacaacagacactgacaca gctgaacaagtgatggcctccttcaagattctggcaggagacaagagttacatcacagca gaggagctgagacgtgagcttccccctgatcaagctgaatactgtattgcccggatggct ccgtacagaggacctgacgcagtgcctggtgctttggattacatgtccttctccacagct ttatatggtgaaagtgacctgtaa

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