KEGG   Rhincodon typus (whale shark): 109925732
Entry
109925732         CDS       T06055                                 
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin-10
  KO
K16499  protocadherin delta 2
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rtp04515]
    109925732 (si:ch73-233f7.1)
Cell adhesion molecules [BR:rtp04515]
 Cadherins
  Protocadherins
   109925732 (si:ch73-233f7.1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Bact_surface_Ig-like
Other DBs
NCBI-GeneID: 109925732
NCBI-ProteinID: XP_048459453
LinkDB
Position
12:66781402..66783936
AA seq 844 aa
MASTWLKWQVITCIISSCVWDRVAGQIRYSIPEELKHGAFVGNIADDLGLNVRELSARRF
RIVPGANTQFLEVNLENGVLFVNEKMDREQLCDLSTSCFLHLEIVIENPLELYRVEVEIL
DVNDNSPGFPWREFRLEIAESVAVGARFPLESAHDPDVGTNSLQTYRLSPNPYFSLEVQT
RSERRKFPVLVLDMPLDRENQALHQLVLTALDGGFPERSGTALLTVVVLDVNDNAPVFDQ
AVYTVCLVENAPINTLVIKLNATDLDQGSNGEVTYSFSHHAPARLRQLFRVEPQTGEIRV
QGVVDYEEASVYEIYIQAKDNGPHTAAVHCTVVVEVIDVNDNAPEVTLTSVSSPVREDAL
PGTVIALISVSDRDSGANGKTSCHIPAQVPFKLQSSFTNYYTLVTSERLDRESVLEYNVS
LTVTDSGSPPLSTVKTIPVKVSDVNDNAPRFAHPSYTVYLMENNAPGASICSVSALDPDL
EQNAYVSYCILNSKVRGTPISTYVSINLNTGNLYALRSFDYEQLKKFQVFVQAWDAGFPS
LHNNVTVNVIILDQNDNAPAIVSPLPLNGSAEMVPRSADPGYPVVKVTAVDADSGQNSRL
SYQLYRATEPGLFSIGPFTGEIRTSRRFEEHDSHKHRLVVHVTDHGKPPLSSSVTINVFI
VDSLPENFSDLTEGPQGIEHFSEFNLYLIVCLGSISFVFLVAIIALISIKCHRRSRHGTL
GRRCSLSACCCCRSGPSRCCLRRKPSRAVLNNSHTNFQLPPSVKGPPSCMEVGGSRSLSQ
TYCYKVCLSPESAKTDLMFLKPYISPPPAAGSNSKPANPYVSAWRRQISGGANVATNGSS
EVST
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggcgagtacctggttaaaatggcaagtgatcacctgcattatatcgagctgtgtttgg
gatcgggtggccggccagattcggtactcgattcccgaagaactgaagcacggggcgttc
gttgggaatatcgccgacgatttgggattgaatgtgagagaactgtctgctcgcaggttc
cgcatcgtgcccggtgccaacacgcagttcctggaggtgaacctagagaatggagtcctc
ttcgtgaatgagaagatggacagggagcagctgtgtgatctgagcaccagctgcttcctg
catttggagattgtgattgaaaacccactggagctgtaccgagtggaagtggagatcctg
gatgtgaatgacaattctcccgggttcccgtggagggagttccgtttggaaatcgccgag
tcggtggctgtcggggcgcgtttcccgctggagagcgcgcacgatcccgatgtaggcacc
aattctctccaaacctaccggctcagccctaacccgtacttcagcctggaggtgcagacc
cgcagcgagcgcaggaaattcccggtactggtgctggacatgcctctggaccgggagaac
caagctctccaccagttggtgctgactgccctggacggtggattcccagagagatccggt
accgctctgctcaccgtggtcgtccttgatgttaacgacaacgcgccggtctttgaccag
gctgtgtacacggtctgcctggtggagaacgctccgataaatacgttggtgattaaactt
aacgccaccgatttggaccaaggctcaaatggagaggtgacttattcctttagtcaccat
gcgccagcgagattgcgccaactattccgggtagagccccaaaccggcgaaattcgggtc
caaggggtggtggattatgaagaggcgagcgtttatgagatttatatccaggccaaggat
aacggtccccacacagcggctgtgcattgcactgttgtggtggaggttattgatgtcaat
gacaatgcccccgaggtcaccctcacttctgtgtccagcccggtccgggaggacgcttta
ccggggactgtcatcgccctgatcagcgtcagcgaccgggattctggcgctaacgggaaa
accagctgccacatcccggctcaggtccccttcaaactccaatcctctttcacgaactat
tacactctggtcaccagcgagaggctggaccgtgaaagcgtgctggagtataacgtgagt
ttaacagtcaccgactccggctcccctcccctttccaccgtcaaaaccatcccggtgaag
gtttccgatgtgaacgacaacgcgccccgttttgcacatccttcctacacggtttacctg
atggagaataacgcgccgggcgcttctatctgctcagtgtctgccctggacccagacctt
gagcagaacgcctatgtgtcctattgcatcttaaacagcaaagtcaggggcacccccatc
tccacgtatgtctccatcaacctgaacacgggcaatctgtacgcactgcgttcctttgac
tacgagcaactgaagaagtttcaggtgtttgttcaagcttgggacgccggcttcccgtct
cttcacaacaacgtgacggtgaacgtgatcatcctggaccagaacgacaatgcgccggcc
atcgtatccccgctgcccctgaacggatcggctgagatggtgccccgttccgccgatccc
ggttacccggtggtcaaggtgacggcggtggacgccgattcgggccagaactcgcggctc
tcttaccagctataccgagccaccgaacccggtctgttcagcatcggcccgttcaccggg
gaaatccgcacgagccgccgctttgaagagcacgactcccacaagcacaggctggtggtt
catgttacagaccacgggaagccaccgctttccagctcggtcactattaatgtcttcatc
gttgacagtctgccggagaacttctcagatttgaccgagggaccccagggcatcgaacac
ttctcggagttcaacctttatttaatcgtctgtctgggctccatctccttcgtgttcctg
gtggccattatcgccttgatctctattaagtgtcacagaaggagcagacacgggaccctg
ggcaggcgctgctctctgagcgcctgttgttgctgccgttccgggccatcccgctgctgt
ctccggagaaagccctcccgggccgttctcaacaactctcacaccaacttccaactgcct
cctagtgtcaaagggccgcccagctgtatggaggtaggcggcagccgttctctttcccaa
acctattgctacaaagtgtgtttgagtcccgaatcggctaagaccgacttaatgttcctc
aaaccgtacatttcaccacctcccgccgcgggtagtaactcgaaacctgctaacccctac
gtgagtgcgtggaggaggcaaatctcaggtggggcaaacgtagcaacaaatggatctagc
gaggtgagtacctag

DBGET integrated database retrieval system