KEGG   Rhincodon typus (whale shark): 109925818
Entry
109925818         CDS       T06055                                 
Symbol
rack1
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-2-like 1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109925818 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109925818 (rack1)
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     109925818 (rack1)
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109925818 (rack1)
  Exosomal proteins of colorectal cancer cells
   109925818 (rack1)
  Exosomal proteins of bladder cancer cells
   109925818 (rack1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 eIF2A Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Cytochrom_D1 WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 109925818
NCBI-ProteinID: XP_020381319
LinkDB
Position
12:complement(38823941..38830465)
AA seq 317 aa
MTEQMTLRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETSYGVPQRSLS
GHSHFISDVVISSDGQFALSGSWDGTLRLWDLTTGSTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTVKLWNTLGVCKYTIQDECHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
NCKLKTNHIGHSGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTSSKAEPPQCTCLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacccttcgcggcaccctaaaaggccacagtggctgggtgacacaa
attgccacaaccccgcagtttcctgacatgattttgtccgcatcccgagataaaacaatt
atcatgtggaagctaactagggatgagaccagctatggtgtcccacagcgttccctcagt
ggccactctcactttattagtgatgtagtcatttcttctgatggtcagtttgccctttct
ggctcctgggatggaactctacgactttgggatttgacaacgggatcgactacccgtcga
tttgtaggtcacaccaaggacgtactaagtgttgccttttcagctgataatcgccaaatt
gtgtctggttcccgtgacaaaactgtaaaactgtggaacactctaggtgtttgcaaatac
acaatccaggatgaatgccacagcgaatgggtatcttgtgttcgcttctcaccaaatagc
agcaaccccatcattgtctcctgtggctgggataaactagttaaggtttggaacctagcc
aactgcaaactgaaaaccaatcatattgggcactctggctatctgaacactgttactgtt
tcccctgatggatccctgtgtgcttctggaggcaaggatggtcaagccatgttgtgggac
ctcaatgaaggcaagcatttgtacacattagatggtggtgacatcatcaatgccttgtgc
tttagccccaataggtattggctctgtgctgctacaggtccaagcattaagatctgggac
ctggaaggaaaaatcatagtggatgaactacgccaggaagtgattagtaccagcagtaaa
gcagaacctccacagtgtacatgtctggcttggtctgcagatggacagacattgtttgct
ggttatactgataacctcatcagggtttggcaggtcaccattggaacaagatga

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