Rhincodon typus (whale shark): 109925884
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Entry
109925884 CDS
T06055
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109925884 (ctnnd1)
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GFIT
Motif
Pfam:
Arm
HEAT
ARM_ARMC5
HEAT_EZ
HEAT_2
Atx10homo_assoc
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
109925884
NCBI-ProteinID:
XP_048476712
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All DBs
Position
48:4374280..4387196
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AA seq
628 aa
AA seq
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MMQDPSPYIEETVTVEEDPDHAPSVVSVETDEDGTTRRTETTVKKVIKTVTTRMVHEMPS
DQFSLDGSSVQGGYTQTLDRKFRSNGESYLGPHGSSTVPRGYSYQEVYGKTPTQRVPYGD
LAPESYGSLSRGVRIDQRYQPPIESYQRAPGRMDVYGAQPQVRGGSNFNLNQSHPERFHS
EPYGLEDDDRSVGYDEPDYGLAHDYPTAKRSATPSDLRNRYFRSRSFDDPLADDVRSDHD
TYYWAPLAQQERAGSMASLHSGRKEPMAWRQPELPEVIAMLNYKLDAVKANAAAYLQHLC
YRNDKLKTEVRRLKGIPVLVEMLDHPKKEVHHAACGALKNIAYGRDADNKKAIKNCDGIP
SLVRLLRKARDMDLNEVITGTLWNLSSHDAVKMEIVDHAVPALCDEVIIPHSGWEQEPNE
DSKPRHVEWQGVLTNTAGCLRNVSSEKKEARQKLRECSGLVDSLMHIVQSEIDQKDVDSK
LVENCVCLLRNLSFQVHKEIPDAARFQEAVGGPSAPAGSSQPKASCFGGKKGKEDWFTRG
RKGAEDPIADADIPKRNTPAKGYELLYQPEVVRLYLSLMKESKNPAVLEAVAGALQNLCA
GRWTVSISEFSSHCLGPAFASAGEKRPG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggatcccagcccgtacattgaagagacagtaactgtggaggaggaccccgat
cacgctccgtccgttgtctccgtggaaacggatgaggatggtaccactcgccggacagag
accacagtgaagaaagtgattaagacagtcaccaccaggatggtccatgagatgccgagt
gaccagttctctctggatggctcctcagtacaggggggttacactcagaccctggacaga
aagttccggagtaacggcgagagctacctgggccctcacggaagctccacagtgccgcgt
ggttactcctaccaggaggtgtacgggaagactccgacccagcgtgtgccatacggagac
ctggccccagagagctacgggagcctgtcacgtggcgtccgcattgaccagcgctaccag
ccccccatcgagagctaccagcgagcaccaggcagaatggatgtctacggggcccagccc
caggtcaggggtggtagtaacttcaatctgaaccagtcacaccctgagagatttcactct
gaaccctacggtctggaggatgatgaccgcagcgtgggctatgatgagcctgactatggc
ttggcacacgactatccgactgccaagcgatcggccacgccttccgatcttcgcaacaga
tacttccggagcaggagcttcgacgacccactggccgacgacgtgcgctctgatcacgac
acctactactgggcaccactggcccagcaagagcgagcgggcagcatggccagcttgcac
agcggccgcaaggagcccatggcctggcgccaacccgagctgcccgaggtcatcgccatg
ctcaactacaagctggacgcggtgaaggccaatgccgcagcctacctgcagcatctgtgt
taccgcaacgacaagctgaagacagaggtcaggcgcctcaagggcatcccagttctcgtt
gagatgctggaccaccccaagaaggaggttcaccacgctgcctgcggggccctcaagaac
atcgcgtacggccgcgatgccgacaacaagaaggccatcaagaactgcgatggcatcccc
tccctggtccgcctcctccgcaaagcccgagacatggacctcaatgaagtcattaccggt
accctgtggaatctctcctcccatgacgcggtgaagatggagattgttgaccatgcggtc
cctgccctgtgtgacgaggtgatcattccacattccggctgggagcaggagcccaacgaa
gactcgaagccacggcacgtggaatggcagggagtgctcaccaacaccgccggctgtctc
aggaatgtcagctcagagaaaaaggaagcccgccagaaactgcgggaatgcagcggattg
gtcgattcattgatgcacatcgtccaatcagagatagaccagaaggacgtggacagcaag
ctcgtggagaactgcgtgtgcctgctgcgcaacctctcgttccaggtgcacaaggaaatc
ccagatgcggcccgcttccaggaggcagtgggtggcccctcagcgcccgcgggatcttcc
caacccaaggccagctgctttgggggcaagaagggtaaagaggactggttcacaagaggg
aggaaaggtgctgaagaccccattgctgacgcggacattccgaagaggaacactccggca
aaaggttacgagctgctgtatcagcccgaggtggtccgcctgtacctctcgctgatgaag
gagtctaagaaccctgcagtcctcgaggctgtggctggggccctgcagaatctatgtgcc
ggccgctggacggtgagtatttctgaattcagctctcactgccttggccctgcctttgcc
agcgctggtgaaaagcgccctgggtga
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