KEGG   Rhincodon typus (whale shark): 109925884
Entry
109925884         CDS       T06055                                 
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1
  KO
K05690  catenin (cadherin-associated protein), delta 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    109925884 (ctnnd1)
SSDB
Motif
Pfam: Arm HEAT ARM_ARMC5 HEAT_EZ HEAT_2 Atx10homo_assoc Symplekin_C
Other DBs
NCBI-GeneID: 109925884
NCBI-ProteinID: XP_048476712
LinkDB
Position
48:4374280..4387196
AA seq 628 aa
MMQDPSPYIEETVTVEEDPDHAPSVVSVETDEDGTTRRTETTVKKVIKTVTTRMVHEMPS
DQFSLDGSSVQGGYTQTLDRKFRSNGESYLGPHGSSTVPRGYSYQEVYGKTPTQRVPYGD
LAPESYGSLSRGVRIDQRYQPPIESYQRAPGRMDVYGAQPQVRGGSNFNLNQSHPERFHS
EPYGLEDDDRSVGYDEPDYGLAHDYPTAKRSATPSDLRNRYFRSRSFDDPLADDVRSDHD
TYYWAPLAQQERAGSMASLHSGRKEPMAWRQPELPEVIAMLNYKLDAVKANAAAYLQHLC
YRNDKLKTEVRRLKGIPVLVEMLDHPKKEVHHAACGALKNIAYGRDADNKKAIKNCDGIP
SLVRLLRKARDMDLNEVITGTLWNLSSHDAVKMEIVDHAVPALCDEVIIPHSGWEQEPNE
DSKPRHVEWQGVLTNTAGCLRNVSSEKKEARQKLRECSGLVDSLMHIVQSEIDQKDVDSK
LVENCVCLLRNLSFQVHKEIPDAARFQEAVGGPSAPAGSSQPKASCFGGKKGKEDWFTRG
RKGAEDPIADADIPKRNTPAKGYELLYQPEVVRLYLSLMKESKNPAVLEAVAGALQNLCA
GRWTVSISEFSSHCLGPAFASAGEKRPG
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgatgcaggatcccagcccgtacattgaagagacagtaactgtggaggaggaccccgat
cacgctccgtccgttgtctccgtggaaacggatgaggatggtaccactcgccggacagag
accacagtgaagaaagtgattaagacagtcaccaccaggatggtccatgagatgccgagt
gaccagttctctctggatggctcctcagtacaggggggttacactcagaccctggacaga
aagttccggagtaacggcgagagctacctgggccctcacggaagctccacagtgccgcgt
ggttactcctaccaggaggtgtacgggaagactccgacccagcgtgtgccatacggagac
ctggccccagagagctacgggagcctgtcacgtggcgtccgcattgaccagcgctaccag
ccccccatcgagagctaccagcgagcaccaggcagaatggatgtctacggggcccagccc
caggtcaggggtggtagtaacttcaatctgaaccagtcacaccctgagagatttcactct
gaaccctacggtctggaggatgatgaccgcagcgtgggctatgatgagcctgactatggc
ttggcacacgactatccgactgccaagcgatcggccacgccttccgatcttcgcaacaga
tacttccggagcaggagcttcgacgacccactggccgacgacgtgcgctctgatcacgac
acctactactgggcaccactggcccagcaagagcgagcgggcagcatggccagcttgcac
agcggccgcaaggagcccatggcctggcgccaacccgagctgcccgaggtcatcgccatg
ctcaactacaagctggacgcggtgaaggccaatgccgcagcctacctgcagcatctgtgt
taccgcaacgacaagctgaagacagaggtcaggcgcctcaagggcatcccagttctcgtt
gagatgctggaccaccccaagaaggaggttcaccacgctgcctgcggggccctcaagaac
atcgcgtacggccgcgatgccgacaacaagaaggccatcaagaactgcgatggcatcccc
tccctggtccgcctcctccgcaaagcccgagacatggacctcaatgaagtcattaccggt
accctgtggaatctctcctcccatgacgcggtgaagatggagattgttgaccatgcggtc
cctgccctgtgtgacgaggtgatcattccacattccggctgggagcaggagcccaacgaa
gactcgaagccacggcacgtggaatggcagggagtgctcaccaacaccgccggctgtctc
aggaatgtcagctcagagaaaaaggaagcccgccagaaactgcgggaatgcagcggattg
gtcgattcattgatgcacatcgtccaatcagagatagaccagaaggacgtggacagcaag
ctcgtggagaactgcgtgtgcctgctgcgcaacctctcgttccaggtgcacaaggaaatc
ccagatgcggcccgcttccaggaggcagtgggtggcccctcagcgcccgcgggatcttcc
caacccaaggccagctgctttgggggcaagaagggtaaagaggactggttcacaagaggg
aggaaaggtgctgaagaccccattgctgacgcggacattccgaagaggaacactccggca
aaaggttacgagctgctgtatcagcccgaggtggtccgcctgtacctctcgctgatgaag
gagtctaagaaccctgcagtcctcgaggctgtggctggggccctgcagaatctatgtgcc
ggccgctggacggtgagtatttctgaattcagctctcactgccttggccctgcctttgcc
agcgctggtgaaaagcgccctgggtga

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