Rhincodon typus (whale shark): 109925987
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Entry
109925987 CDS
T06055
Name
(RefSeq) beta-1,3-galactosyltransferase 5-like
KO
K03877
beta-1,3-galactosyltransferase 5 [EC:2.4.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtp01100
Metabolic pathways
Module
rtp_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109925987
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
109925987
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109925987
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Type 1 chain
109925987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
109925987
NCBI-ProteinID:
XP_048450408
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MVIIIVRKGMFPRKVRFLCYHLVLVLSLFLLFSRWLSSPSQHIRKELGISPVPGRVFQVR
PDLECDREPPFLMLLVTTRPQEVSERGAIRETWGAERRLGARRICTFFLLGHGGAYQGQI
HRESQSYRDILQGDFTDTYYNLTEKVLLGLEWVHRFCPSARFVMKTDSDMFVNVFYLSQL
LGGKNTTGFFSGQLMRDIRPIRNKANKWYVSEEEFAPTLYPRYCSGTGYVLSGDLAGKIW
GISKSIPLLKLEDVYVGLCLTRLAVSPVPVSSRRVFFTRHVPFSVCRYRSLVTSHRVSPS
QLRLYWKSLEEAEASECPLTP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatcattgtcaggaaagggatgtttcccaggaaagtccgctttctgtgctac
cacctcgtcctggtcctgagcctgttcctcctgttctcccggtggctgtcttccccatca
cagcacattcgcaaggagctgggaatctccccggtgcccggtcgtgtcttccaggtgagg
ccggacttggagtgtgacagggagcctcccttcctcatgcttctggtaacgacgaggccg
caggaggtttcggagcgaggggccatccgggagacgtggggtgcagagaggcgcctcggc
gccaggcgcatctgcacattcttcctgctcggacatgggggcgcgtaccaggggcagatc
catcgggagagccagtcctaccgggatattctccagggagacttcactgacacctattac
aatttaacggagaaggtgttactgggtctggagtgggtccatcgattctgtccctcagcc
cgttttgtgatgaagactgactcggacatgtttgtcaatgtcttctacctaagccagctg
ctaggaggtaagaacaccacgggtttcttcagtggccagctcatgagggacattcggccc
atcaggaacaaggccaacaagtggtacgtcagcgaggaagagtttgctcccaccctgtat
cctcgctactgctcaggaacgggctatgtcctctctggagacctggctgggaagatctgg
ggcatctccaaatccatcccgctcctcaaacttgaagacgtttatgtgggcctctgcctg
accagactggcagtctccccggtcccggtgagcagtagacgggtctttttcactcgccat
gtccccttctcagtttgccgctatcgctcgctcgtcacctcgcacagggtgagtccgtct
cagctgcgtctctactggaaatccctggaagaggctgaggcatcagagtgccctttgacc
ccttaa
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integrated database retrieval system
