Rhincodon typus (whale shark): 109926050
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Entry
109926050 CDS
T06055
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03010
Ribosome
rtp04120
Ubiquitin mediated proteolysis
rtp04137
Mitophagy - animal
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
109926050 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109926050 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109926050 (uba52)
04137 Mitophagy - animal
109926050 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rtp03011
]
109926050 (uba52)
04121 Ubiquitin system [BR:
rtp04121
]
109926050 (uba52)
Ribosome [BR:
rtp03011
]
Ribosomal proteins
Eukaryotes
Large subunit
109926050 (uba52)
Archaea
109926050 (uba52)
Ubiquitin system [BR:
rtp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
109926050 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
109926050
NCBI-ProteinID:
XP_048450658
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVLDPSLRILAQKYNCDKMICRKCYARLHPRASNCRKSKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagactctgaccgggaagaccatcactttggaggtggaacccagc
gacaccatcgagaatgtaaaggccaagatccaggataaggaggggatccccccagatcag
cagcgtttaatcttcgctgggaagcaactggaggatggccgtaccctgtctgattacaac
atccagaaagagtcaactctccatctggtgctacgtctgagaggtggtgttttggacccg
tccctccgcattctcgctcagaaatacaactgcgacaagatgatctgccgcaagtgctac
gcacgcctccaccctcgtgcatcaaactgtcgtaaaagtaagtgtggccacacaaacaac
ctgcgccctaagaagaagctgaagtaa
DBGET
integrated database retrieval system
