Rhincodon typus (whale shark): 109926503
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Entry
109926503 CDS
T06055
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109926503
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
109926503
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF2594
Motif
Other DBs
NCBI-GeneID:
109926503
NCBI-ProteinID:
XP_020381937
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Position
40:12147417..12152211
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AA seq
796 aa
AA seq
DB search
MSYILETVSSPSSSYRRLESKSYSSRAAASSRPQPWSRVSAPAPVLTSSSSVSYRRLAGG
VQAPRAYSSSESLDFSQSSGLNGDYRGSGGRNEKELLQGLNDRFAGYIDKVHSLEQHNKQ
LEAEIQSQRQKQASHGQLGEVYEQELRELRSLIEQVNHDKALLQLQTEHLDDDLQRLRER
LEDEARLREDTEANIRGLRKEAEDAALLKLEMEKKAQSLQDEIAFLRANHEEELAELFAQ
IQASQVTVERKDGLKTDLSSALKEIRSQLEGHSAKNLQQTEEWFKCRYAKLNEAAEINKD
AIRSAREEIGEYRRQLHTKCIELESVRGTKESLERQISDIEDRHNADVSNYQETVQQLEN
ELRNTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEESRYTFSGSITGPSFPYRPP
TTPTALVKVQKTKEAPKLKVQHKFVEEIIEETKVENEKAELDELDLAEAVEVSAAESSVE
EEEVVKEVVVTTVKTAVQAEPEAKGEEEEEAKEEEEEEKEEEEKEEEEKGEREGGADQEE
REEEEEAEGEAKEAEESEEVKEKIESVKLEESKALPEDQAKKASEEEEEEEVTKKEEAAE
EPKKELTENGEEAAPEDAKKSKEAVEEKLVSEKKVEAVEEGKEAATKVKSPQKEEAKVEL
EDKSPKEEKAPEAEEKKDEDKSKDEGTTINGEVKEKGDGTKEKEEESQIISNGVDQSPTK
EEDSDIVSHMKTATKTIHKVIDDDDGMTKHIKEITKSVTVTQTMEETEEVVQETIVSTKT
VEKTSHSVIKKEEDNE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagttacatcctggagacggtgagcagtccttcctcctcgtaccggaggctggagagc
aagagctacagcagccgggccgccgcttcctctcgccctcagccgtggtctcgggttagt
gcacccgctccggtgctgacctcgtcctcctctgtgtcttaccggcgcctggctggcggg
gtgcaggctccccgggcttacagctcttccgagagcctcgacttcagtcagtccagcggc
ctgaatggagattacaggggaagcgggggccggaatgagaaggaactgctgcagggttta
aacgaccgcttcgcgggctacatcgacaaggtgcactcgctcgaacagcacaacaaacaa
ctggaggctgagattcagtctcagcgccagaagcaagccagccacgggcagctgggggag
gtgtacgagcaggagctgagggagctcaggagcctgatagagcaggtgaaccacgacaag
gcgctactccagctccagaccgagcacctcgatgatgacctgcagcggctacgggagcgc
ctggaggacgaggcgaggctccgggaagacaccgaggccaacattagggggctgcggaag
gaggcggaggacgcggcgctgctcaagctggagatggagaagaaagctcagtcccttcag
gacgagatcgctttccttcgggctaaccacgaggaagagctggccgaactcttcgcccag
atccaggcgtcccaggtcacggtggagcgcaaggacgggctgaagaccgacctgagctcg
gcgctgaaggagatccgctcgcagctcgagggccactcggccaagaacctgcagcagacc
gaggagtggttcaagtgccgctacgccaagctgaacgaggcggccgagatcaacaaggac
gcgatccgctcggcccgcgaggagatcggcgagtacaggcgccagctccacaccaagtgc
atcgagctcgagtcggtccgcggcaccaaagagtccctggagaggcagatcagcgacatc
gaggaccggcacaacgccgatgtctccaactaccaggaaaccgtccaacagctggagaat
gagctccgcaacaccaagtgggaaatggcccgtcacctgcgggaataccaagatttgctg
aatgtgaaaatggctttggatatcgagattgccgcttacaggaaactgttggaaggtgaa
gaatctagatataccttctctggaagcatcactggcccctccttcccctatagacctccg
accacacccacagccctggtcaaagtgcagaaaaccaaagaagcccccaagttgaaagtg
cagcacaaattcgtggaagagatcattgaagaaaccaaagtggaaaatgagaaagcagaa
ctggatgagctggacttggccgaggcagtggaagtgtctgcagctgaatccagtgtcgag
gaggaggaggtggtcaaagaggtagttgtaaccacagtcaagactgcagttcaggctgag
ccagaagcaaagggtgaggaagaggaggaggcaaaggaggaggaggaggaggaaaaggag
gaggaggaaaaggaagaagaggagaaaggtgaaagagaaggtggtgctgaccaggaagaa
agagaggaggaggaagaggcagaaggtgaggccaaggaggcagaagaaagtgaagaagtc
aaggagaagattgaaagtgtgaagctggaggaatcgaaagctctgccagaggatcaggca
aagaaagcaagtgaggaggaggaggaagaagaagtcaccaagaaagaagaagctgctgaa
gagcctaaaaaagaactcacagaaaatggggaggaagcagcacccgaagatgctaagaag
agcaaggaagcggtcgaagagaagcttgtttctgagaaaaaggttgaggcagttgaagag
ggcaaagaagcagcaacaaaagtcaaatcaccacagaaagaggaggccaaagtagaattg
gaggacaaatcaccaaaagaagagaaagccccagaagctgaggaaaagaaggatgaagac
aagtcaaaagatgaaggcacaaccatcaatggagaggtcaaagagaaaggggatggcacc
aaggaaaaggaggaagagtcgcaaatcatttccaatggggttgatcagagtcctacaaag
gaggaggactctgacattgtctcccacatgaagaccgcaacaaagactatccataaggtc
atcgatgatgatgacgggatgaccaaacacatcaaggagatcaccaaatctgtcacggta
actcagacaatggaggagacagaagaggttgtccaggagacaatagtgtccactaagacg
gttgagaaaacctcacactcggtcataaagaaggaggaggacaacgagtga
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