Rhincodon typus (whale shark): 109926619
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Entry
109926619 CDS
T06055
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109926619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109926619
04147 Exosome [BR:
rtp04147
]
109926619
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
109926619
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109926619
Exosomal proteins of other body fluids (saliva and urine)
109926619
Exosomal proteins of colorectal cancer cells
109926619
Exosomal proteins of melanoma cells
109926619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
FKBP15
FPP
TPR_MLP1_2
CCDC39
TPR
TBCA_PH
DUF4494
DUF1664
HalX
GAS
CENP-F_leu_zip
MbeD_MobD
HH_AprE
AATF-Che1
PspA_IM30
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
109926619
NCBI-ProteinID:
XP_020382042
LinkDB
All DBs
Position
41:complement(7801357..7804682)
Genome browser
AA seq
419 aa
AA seq
DB search
MSFRSYSSLSTHGGPMSLRRSVPLQSSSSSISGFGQRMSVSRVSIARPVGMVSGGGAGAS
IGIGIGGVSNQKETMQGLNDRLANYLEKVRSLETANANLELQIKEHLESREASVRDWSTY
EKPLSDLRKEVYDMTVENARLVLQIDNARLAADDFRVKWESELSIRQSVENDINGLRKVI
DDTNIGRLHLEGEIESLKEELIYIRKNHDDEVKALRSQITDSSVQVEVDSPQGPDLAKVI
AEIRSQYEEVAQKNKDDAENWYKSQIDNYKVEVEHNTEELRGAKVQVTELHRQVQSLDVE
LESLQSMKNSLEGTLKDTELRYDMELQGLNGMIAKLEGDLFQIRSDMQSQVREYESLLNV
KMKLEAEIATYKRLLDGEDIDALVESTSGVTSKTIKKTVVTTQKLVDGNVVSDETVRIS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcagaagttattcctcgctgtcgactcacggtggtcccatgtccctgcggcgg
tctgtgcccctgcagtccagctctagcagcatcagtggcttcggccagaggatgtccgtc
agccgggtgtcgatagcccggcccgtaggcatggtcagcggcggcggcgccggcgccagc
atcggcattggcatcgggggggtcagcaaccagaaagagaccatgcaaggcctgaacgac
cggctggccaactacctggagaaagtgcgcagcttggagacggccaacgccaatctggag
ctgcagatcaaggagcatctggagtccagggaagccagcgtccgtgactggagcacctac
gagaagccgctgagtgacctccgcaaagaggtctatgacatgaccgtcgaaaatgctcgt
ttggtacttcagatcgataatgctcgccttgctgctgacgacttcagagtgaagtgggag
tctgaactgagcatcaggcagtctgtggagaacgacatcaacggactgcgcaaagtcatc
gacgacaccaacattgggcgcctgcacctggaaggtgagatcgagtctctcaaagaggag
ctcatctacatcaggaagaaccatgatgatgaagtcaaagctcttcgctcccagatcact
gactcgagtgtgcaggttgaagtggactctcctcaaggtccagatctggctaaggtcatt
gctgagatcagaagtcaatatgaagaggtggcacagaaaaacaaggatgatgcagagaac
tggtacaagagccagatagataactacaaagttgaagtcgaacacaatactgaagaactg
cgaggtgcaaaggtacaagtcactgaactgcaccggcaggtacagtctctggatgttgag
ctggagagtcttcaaagcatgaaaaactcactggaaggcactctcaaagatacagaactg
agatatgatatggagctgcagggcctaaatggcatgattgccaaactagagggagatctg
tttcagatccgcagtgatatgcagtcccaggtcagagagtatgaaagcctcttgaatgtg
aagatgaaacttgaggctgaaatagcaacatacaaacgtctgctggatggagaagacatc
gacgcacttgttgagtcaacctctggtgtcacctcaaaaactatcaagaaaacggtggtc
accactcagaaacttgttgatggcaacgtggtatctgatgaaacagtccgcatcagctaa
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