Rhincodon typus (whale shark): 109926691
Help
Entry
109926691 CDS
T06055
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04136
Autophagy - other
rtp04140
Autophagy - animal
rtp04145
Phagocytosis
rtp04216
Ferroptosis
rtp04621
NOD-like receptor signaling pathway
rtp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109926691 (atg5)
04140 Autophagy - animal
109926691 (atg5)
04136 Autophagy - other
109926691 (atg5)
09143 Cell growth and death
04216 Ferroptosis
109926691 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109926691 (atg5)
04622 RIG-I-like receptor signaling pathway
109926691 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109926691 (atg5)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109926691 (atg5)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109926691 (atg5)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109926691 (atg5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF8018
Motif
Other DBs
NCBI-GeneID:
109926691
NCBI-ProteinID:
XP_020382114
LinkDB
All DBs
Position
5:24096642..24235125
Genome browser
AA seq
275 aa
AA seq
DB search
MTDDRDVLRDVWFGRIPTCFTLSQDEVTEREAEPYYLLLPRVSYLMLVTDKAKKHFQKVM
RQEDIGEMWFEYEGVPLKWHYPIGLLFDLHASNTALPWNIIVHFKNFPESELLHCLTKDA
VEAHFMSCIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYPTEEG
GFRYVPFRIYQPLNERPFIQKLFRPISSEGHPHNLGDLLKEMFPAAVTPEDMEKQFQVVI
HGIEPMLETPIQWLSEHLSYPDNFLHISIIPLPKD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacagagatgtattacgggatgtttggtttggaagaataccaacctgtttc
actttatctcaggatgaagtaactgaaagagaggctgaaccttattatctgctgttacca
agagtgagttatttgatgctggtaactgacaaagctaaaaagcacttccagaaagtaatg
agacaagaggatataggagagatgtggtttgaatacgaaggagtacctttgaagtggcat
tatccaattgggttactttttgaccttcatgcatcgaacaccgcactaccatggaacatt
atagtacattttaagaatttccctgaatcggaacttcttcattgcctcacaaaagatgct
gttgaagctcattttatgtcttgcattaaggaagctgatgccttaaagcacaaaagtcaa
gtaatcaatgagatgcagaaaaaggatcataaacaactctggatgggcttacaaaatgat
aagttcgaccagttttgggccatcaatcgaaaacttatggagtatccaacagaggaagga
gggttccgatatgttcctttcaggatatatcagccattaaatgaaaggccatttattcag
aaactatttcgtccaattagttcagaaggacatccacataatcttggtgacttgttgaaa
gaaatgtttcctgctgctgtaactcctgaagatatggagaaacagtttcaagtagtgatt
cacgggattgaaccaatgctggaaacaccaattcagtggctcagtgaacatctgagttac
ccagacaatttcctgcatattagtatcattcctttacctaaagactga
DBGET
integrated database retrieval system