KEGG   Rhincodon typus (whale shark): 109926691
Entry
109926691         CDS       T06055                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
  KO
K08339  autophagy-related protein 5
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04136  Autophagy - other
rtp04140  Autophagy - animal
rtp04145  Phagocytosis
rtp04216  Ferroptosis
rtp04621  NOD-like receptor signaling pathway
rtp04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109926691 (atg5)
   04140 Autophagy - animal
    109926691 (atg5)
   04136 Autophagy - other
    109926691 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    109926691 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109926691 (atg5)
   04622 RIG-I-like receptor signaling pathway
    109926691 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109926691 (atg5)
   03029 Mitochondrial biogenesis [BR:rtp03029]
    109926691 (atg5)
Membrane trafficking [BR:rtp04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    109926691 (atg5)
Mitochondrial biogenesis [BR:rtp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    109926691 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF8018
Other DBs
NCBI-GeneID: 109926691
NCBI-ProteinID: XP_020382114
LinkDB
Position
5:24096642..24235125
AA seq 275 aa
MTDDRDVLRDVWFGRIPTCFTLSQDEVTEREAEPYYLLLPRVSYLMLVTDKAKKHFQKVM
RQEDIGEMWFEYEGVPLKWHYPIGLLFDLHASNTALPWNIIVHFKNFPESELLHCLTKDA
VEAHFMSCIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYPTEEG
GFRYVPFRIYQPLNERPFIQKLFRPISSEGHPHNLGDLLKEMFPAAVTPEDMEKQFQVVI
HGIEPMLETPIQWLSEHLSYPDNFLHISIIPLPKD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgacagatgacagagatgtattacgggatgtttggtttggaagaataccaacctgtttc
actttatctcaggatgaagtaactgaaagagaggctgaaccttattatctgctgttacca
agagtgagttatttgatgctggtaactgacaaagctaaaaagcacttccagaaagtaatg
agacaagaggatataggagagatgtggtttgaatacgaaggagtacctttgaagtggcat
tatccaattgggttactttttgaccttcatgcatcgaacaccgcactaccatggaacatt
atagtacattttaagaatttccctgaatcggaacttcttcattgcctcacaaaagatgct
gttgaagctcattttatgtcttgcattaaggaagctgatgccttaaagcacaaaagtcaa
gtaatcaatgagatgcagaaaaaggatcataaacaactctggatgggcttacaaaatgat
aagttcgaccagttttgggccatcaatcgaaaacttatggagtatccaacagaggaagga
gggttccgatatgttcctttcaggatatatcagccattaaatgaaaggccatttattcag
aaactatttcgtccaattagttcagaaggacatccacataatcttggtgacttgttgaaa
gaaatgtttcctgctgctgtaactcctgaagatatggagaaacagtttcaagtagtgatt
cacgggattgaaccaatgctggaaacaccaattcagtggctcagtgaacatctgagttac
ccagacaatttcctgcatattagtatcattcctttacctaaagactga

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