Rhincodon typus (whale shark): 109926780
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Entry
109926780 CDS
T06055
Name
(RefSeq) TBC1 domain family member 30-like
KO
K24800
TBC1 domain family member 30
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109926780
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109926780
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Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF4682
Motif
Other DBs
NCBI-GeneID:
109926780
NCBI-ProteinID:
XP_048467814
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All DBs
Position
25:15541766..15613843
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AA seq
744 aa
AA seq
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MNQDQIPVVNLNSARHAGRCLRKRNRSLGSVLSNVLQKRKCISRSAPRLLCTLESGADPR
VKVNTECLAVQNEFQQVYCPISFGQQFGLAICSKVYHKWFETCRAIVQLPAGIPKQWRPR
VWITLADHHLQSISIDWEKTKHFFLNEQRNPNEDALGIQIDKDLRQSSSSLYGGTDVEQF
YSALKRLLLAYAHWNKRIGYCQGFIIPAAVILKVMERDEGDALKVLVYLLDRVLPDNYFA
NNLSALTVDIAVFHDLLRIKLPELSQHLDRLCTAAKKANDGRCILPLTSVVTMQWFLTLF
TSCLPKDTILRVWDAILFEGSEVLFRVALALWAQLGEWIKKCQRPDEITKCLNQEMMEIN
LTDCSKLMQTVYSMATFPFPQVVELREKYSPSSFQAKVAASSHHLKEAQCKGKASDESHG
TCTFISAVGFPGIHNPAHCQKTAQNEKRKSSCNLGKTVPATTGDSVSHPQVAVNSTEYTA
TRTPVLKQHHSKMTKRQQQNQYLTPRHGNNESCSPGTPLHSKKSKVINRFLGGKKLKNSS
KSNRVHHTPNPRAPQPIQKEQKNKITVPWCSQKRVPRNVLTRNLKVKSGCSDTVGLLEDQ
TDSSKAEVVKVDDPAHRITGENREVSQLHCEARTYFSEHLAIELCKKDVDNLARVENLFK
TLQIGEPNHSLFAAESSNQLGVCDCCVDLRKDRFKAKNFTFLSAIKANTTDNTLLADLSG
NSLKTQNLGLRGSCSNIQILPFNK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggatcaaatccctgtagtaaatctgaattcagccagacatgctggaaggtgc
cttagaaaaaggaaccgcagcctcggcagtgtcctcagcaatgttctgcagaaaaggaag
tgcatttcacggtctgcacctcgattgctctgcaccttagaatcaggtgctgatccacga
gtgaaggttaacactgaatgtttggctgttcaaaatgaatttcaacaggtttactgcccc
atttcttttgggcaacagtttgggctagcgatctgttctaaggtataccataagtggttt
gagacctgtcgagctattgttcagttaccagcaggaattcccaagcagtggaggccaagg
gtttggataacgttggcagaccatcaccttcaaagcatttccattgactgggaaaaaacc
aagcatttctttcttaatgagcaaagaaacccaaatgaggatgcattaggaatccagata
gacaaggacctgcgtcagtctagctcgagcctttacggtggcactgatgtggaacagttc
tacagtgcattgaaacgacttttactagcctatgctcactggaataagagaattggctac
tgtcaaggtttcataataccagcagcagtcattctgaaggtgatggaaagagatgagggt
gatgcattgaaggtcctggtctatctacttgacagagttcttccagacaattattttgct
aacaatctcagtgctttgaccgttgatattgcagtcttccatgatctgttaagaattaaa
cttcctgaactttcacaacatctggaccgtctttgcacagcagccaaaaaagccaatgat
gggagatgcattctgccacttaccagtgtcgtcaccatgcagtggtttctgactctcttc
acctcctgtcttcccaaagacaccatcctccgggtttgggatgccatcttgtttgaaggg
tcagaggtgctatttcgagtggctctagcattatgggctcaactaggagagtggatcaag
aagtgtcaaaggcccgatgagatcactaaatgtctgaatcaggagatgatggagattaac
ttgacggactgcagcaaactgatgcagactgtgtattcaatggcaacttttcccttccca
caagtggttgaactgagagagaagtatagtccttcatcgtttcaagcaaaggttgctgcc
tcaagccatcacttgaaggaagctcagtgcaagggaaaagcatcagatgagagtcatgga
acctgcactttcatttctgcagtgggattccctgggatccacaatccagcacactgtcag
aaaacagctcaaaatgaaaagcgaaaaagcagctgcaatttggggaagactgttccagcc
acaactggtgatagtgtatcacaccctcaagtagcagtgaacagcacagagtacacagca
acacgtacacctgtgttgaagcaacaccactcaaaaatgaccaagagacagcaacaaaac
cagtacctaactcccagacatggtaacaatgaatcttgctctcctgggacaccacttcat
tccaaaaagtctaaagtcataaatcgattccttggtggcaaaaagctaaagaacagcagc
aaaagtaaccgagtccaccacaccccaaatcccagggcacctcagcccatacagaaagaa
cagaaaaataagataaccgtcccttggtgttctcaaaaaagagtccctcgcaatgtcttg
accaggaatctgaaggttaagtcaggctgcagtgatacagtaggcctgctggaagaccag
acggatagctccaaggcggaagtcgtcaaagttgatgatccagcccatagaataacggga
gagaacagggaagtttctcagttacattgtgaagccagaacgtattttagtgaacatttg
gccatcgagttgtgcaaaaaggatgtcgacaatttggccagggttgaaaatttattcaag
acacttcaaataggggagccaaaccattctttatttgcagcagaatccagcaaccagcta
ggggtatgtgattgttgtgtggacttgagaaaagatcggttcaaagctaagaatttcaca
tttctgtctgctatcaaagcaaataccacagacaatactttacttgcggatctctctgga
aactctctcaaaacacaaaatctaggtttacgtggatcttgcagcaacatccagatactg
ccattcaataaatga
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