Rhincodon typus (whale shark): 109926835
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Entry
109926835 CDS
T06055
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109926835 (tshz1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109926835 (tshz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
Zap1_zf1
zf-met
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_3rep
tify
Actin_micro
DUF7410
Motif
Other DBs
NCBI-GeneID:
109926835
NCBI-ProteinID:
XP_020382272
LinkDB
All DBs
Position
4:37795621..38032602
Genome browser
AA seq
1049 aa
AA seq
DB search
MPRRKQQAPRRSAAYVPEEELKAAELSQDLQDKELPPGSDQEHEFVCAEEDDNKEVPSYQ
NSPASTPTNPEPGYGSPASDTSDQLAESQSTSSKDGQEKEEGLGMDSLLVSRDSLAQMKA
AYSNFLSSSYWTSLGLDLKNANQPSVSTSSNGSSTHSGTGGGAGYDWHQAALAKTLQQTS
YGVMPESSLFSTVQLYRQHNKLFGSVFTGASKFRCKDCSSAYDTLVGLTVHMNETGHYRD
DNQDKDANNPRKWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ
KVPLKEPVPALASKLLPPNKRRVQPDTQPCSPESAANPTGVPASESASAQKAANPYVTPN
NRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTTHMMVTGHFLKVTNSASKKGK
QLVFDNVGEEKVQSIPLPPSTPTRMAAPTPQTKPETPPSPVTEPRKEHEEEEEPLEQNEK
EQEIKEERDNPTEKFESTSQYQYLREEDLDESPKGGIDILKSLENTVTTAINKAQNGAPT
WGGYSSIHAAYQLSGTIRPFQPTVQNVQLTPFYTNSVKALSSEHLTAVESSECHSPPPQK
SNVHAMEELVEKVTGKMTIKSEEKPVEKEPVVTPVTRTSCSSSPPSAKDPPKAEDFDGAA
QLKRGAEGEEVKVKKESNLETSSPNGTECLKSTVSNGCNSMAIITDHSPESPFVNPLSAL
QSIMNTHLGKAAKPLSPSLDPLAMLYKISNSVLDKPIFPAAQVKQADIVDRYYYENNDQP
IDLTKSKSSKKLISAMTETILSSSRENALLDISDMVKNLTGRLTPKSSTPSTVSEKSEAD
VSSFEDTLEEISPVQKRKGRQSNWNPQHLLILQAQFAASLRESSEGKYIMSDLNLHERVH
ISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTPSSYIGH
LESHLGFSMKDLSKLSIEQIREQQAISKVIPNKTLSSVGLSEEDISCTFQCKMCNRTFAS
KHAVKLHLSKTHGKSPEDHLLYVTEFEKQ
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaaacaacaagcaccccggcgctcggcagcatatgtgcctgaggaagag
ctgaaagcagcggagctcagccaagatcttcaggacaaagaattgccaccagggagtgac
caggagcatgagtttgtgtgtgctgaggaagatgacaataaagaagtgcccagttaccag
aattcacccgccagcacgccaactaacccagagccgggctacgggtcacccgccagtgac
accagcgatcagctggctgagtcccagagcacctcatctaaggatgggcaggaaaaagag
gaggggctgggcatggacagcttactcgtctcacgggacagcctggcacagatgaaagcc
gcctactccaacttcctgagcagctcgtactggacgagcctgggcctggacctgaagaac
gcgaaccagccgagtgtcagcaccagcagcaatggcagcagcactcacagtggtaccggc
ggtggggcaggctatgactggcaccaggccgccttggccaaaaccctgcagcagacctca
tacggagtgatgcccgagtccagcctgttcagcacggtgcagctgtaccggcagcacaac
aagctcttcggctccgtcttcaccggagccagcaagtttcggtgcaaggactgcagctct
gcctacgacaccttggtaggcctgacggtgcacatgaatgagacgggccactaccgcgat
gacaaccaggacaaggacgcaaacaacccccgcaagtggtcaaagcccaggaagcgttcc
ctcatggagatggagggtaaggaggacgcacagaaggtattgaagtgcatgtactgtgga
cattccttcgagtccctgcaagatctcagcgtccacatgatcaagaccaagcattaccag
aaagtgcctctcaaggagccggttcctgcccttgcctctaagctgctgccacccaacaaa
cggagagtccagcccgacacccaaccttgctcgccggagtccgctgccaatcccacgggg
gtgccggccagcgagtcggcttcggcgcagaaagctgccaatccctacgtgacccccaac
aaccgctacggctaccagaacggcgccagttacacctggcagtttgaggcccggaaagcg
cagatactgaagtgcatggagtgcggcagctcccacgacacattgcagcagctgaccacc
cacatgatggtgactggccatttcctgaaagtcaccaactctgcctccaagaaggggaag
cagctggtttttgacaatgtgggtgaggagaaagtccaatccatccccttgcccccttcg
actccaacgcggatggcggcgcccaccccccagacgaagcccgaaacgccaccttcaccg
gttaccgagcccaggaaggaacacgaggaggaggaggagccactggaacagaatgagaag
gaacaagaaataaaggaggagagagacaatcccacagaaaagtttgagtccacctcacag
tatcagtatctccgggaagaggacttggatgaaagtcctaaaggtgggattgatattctc
aagtccttagagaacactgtcacgacagccattaacaaagcccagaatggggcacctact
tggggcggctactccagcattcatgcagcatatcagctttcagggaccatacgacccttt
cagccaacagtgcagaacgttcagttgaccccattctacactaatagtgtcaaggccctg
tcttcagagcatctcactgcagtggagtcttcagagtgccattcaccaccacctcaaaag
agcaatgtccacgcaatggaggaacttgtggagaaggtgacaggtaaaatgacgattaag
tcagaggagaaaccagtagagaaagagcctgtggtcacaccggtgaccaggacaagctgt
agctcatcacctcccagtgctaaagaccctcccaaagctgaggactttgacggtgcagct
caactgaaaagaggtgctgagggggaggaagtgaaagtgaaaaaagagagcaatttagag
acctcttctcccaatgggacagaatgtttgaaatcaactgttagcaacggctgtaacagt
atggcgattattacagaccattcaccggaatcaccatttgtcaatccacttagtgcacta
cagtcaattatgaacacacacttgggcaaggctgccaagccattgagccctagccttgac
ccactggccatgctctacaaaataagcaacagtgtgttagacaagcctatattccctgcc
gctcaggtcaaacaagcagatattgtagatcgatactactatgaaaacaatgaccaaccc
atagacttaacaaagtcgaaaagcagtaaaaagctcatttcagccatgacagaaacaata
ctctcctcctcgagggaaaacgctttgttggatatttctgacatggtcaagaacctcacg
ggccggttgacacccaagtcttcaaccccatcaactgtttcagagaagtccgaagcagat
gtgagcagtttcgaggataccttagaggagatctctccagtgcagaagaggaagggcaga
cagtctaactggaaccctcagcaccttttgatactccaagctcagtttgcggccagctta
cgtgagtcctctgaaggcaaatacattatgtcggacctgaacctacacgagcgggtgcac
atttcaaagtttactggtctttccatgaccacaataagccattggctggccaatgtaaag
tatcaattgagaaggacaggtggaactaaattcctgaagaacttagatacaggtcaccca
gttttcttctgtaacgattgtgcctctcagtttaggactccttccagctacataggccat
ttggaatctcacttaggattttctatgaaggatctctcgaagttatcaatagagcagatt
cgggagcagcaggcaatttcaaaggtcataccaaataagacactgagttcagttgggttg
tcagaggaagacatcagctgtacattccagtgtaaaatgtgcaaccggacctttgcaagc
aaacatgcggtcaaactgcaccttagcaaaacacatggcaaatctccagaggaccatctg
ttatatgtaactgaatttgaaaaacaatag
DBGET
integrated database retrieval system
