Rhincodon typus (whale shark): 109926848
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Entry
109926848 CDS
T06055
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109926848
Cell adhesion molecules [BR:
rtp04515
]
Cadherins
Protocadherins
109926848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF7800
Motif
Other DBs
NCBI-GeneID:
109926848
NCBI-ProteinID:
XP_048453624
LinkDB
All DBs
Position
6:102957118..102966214
Genome browser
AA seq
1036 aa
AA seq
DB search
MSPERGRSRVAGVPGCSPSREPCFLLLVLLLAPTMSDCKTVRYSTYEEQEPGTVIGNLAT
DLQLEAAGGAGGQSGFRLMPEYNGSVPVRVGERDGQLTVGSRIDREQLCEEREPCLLLLD
VVSFSRDKFLLIHVEIQVQDINDHYPEFPQPEIELEISESSAPGTRLPLPAALDADTGSY
SVRGYELSVNGHLELELSDGAGSGGVQQPVPAPTLLLVKPLDRESEAELSLKLRARDGGN
PPRSGEARLRVRVLDENDNAPAFGSGSLELELREDTAPGSLLLQLEARDPDQGLNGELRF
TFSPRVEADARRLFRLEPRSGRLSLNAQLDHEARARFELEVEARDRGARPRASSCRVAVR
VLDVNDNAPEIRVSALGPGPGEASGLASITEAAEPGSFVALVSVWDRDSGANGRLSVSLL
GPRELHLRPAYGINHYMIVTAERLDRERDTEYNVTLVAEDQGPDPRRTVRPFTVTVTDVN
DNAPAFPRSVYRLSLAENNLPGAQLGTVRARDPDLGPNGRLTYRLLQPHEGPGPGPGPGP
GLQPPAVAVEPHTGSLYALRSLDREELPELELLLQATDGGSPPLSGSTTVRLIITDRNDN
APFITHPPPPPPSPGNRSAAPAPAKMALPGGAPRGYLAARVRAQDADEGPNGRLSYRIVS
GEPPGLFTIRPDTGDVYLGRPLSVSPAGPGPGAFSLVVAVSDGGLPPLSSTVTVSFTAGP
GPRPAPAPSGSPGPAQRSWDTSFTVIAVLAAGCVALLLAIVGIASTCGTGDKSRGGHGGG
RPPQALDPRPDAARPPSPGGLHSDGDSEEARKGVSLLETQHQLPGNTQESFMPEPDVNHG
AFCTVAFHQNIKTHVCPGQDVFSGKDSGKGDSDFNDSDSDISGDGSRKGHAVIDQRQNGV
FPCRKKSQTPCSSDPHYNLTSQTTECGKFSSHSKQSYVLAYSSIPATLLHSSSGAVSSIL
QDQPLKYTQQYGHVTRSEPQTSESVLSRESGRTGPSLHPPVIQRPFKTTSSAYNASGQRY
QTSYLNTALSEVATSF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgagagaggtagaagcagggttgctggtgtcccgggctgcagtccctccagg
gagccctgcttcctgcttcttgtcctcctcctcgctccgacgatgagtgactgtaaaacg
gtcagatattccacgtacgaggagcaagagcccggcaccgtgatcggaaacctggccacc
gatctgcagctggaggcggccggcggggccgggggccagagcggtttccgactgatgccc
gagtataacggctcggtcccggtgagggtcggggaaagggacgggcagctgacggtagga
agccgcattgaccgggagcagctttgcgaggagcgggagccgtgcctgctgctcctggat
gtggtgagcttctcccgggacaagttcctcctgatccatgtggagatccaagtgcaggac
attaatgaccattaccccgagttcccccagcccgagatcgagctagaaatctccgaaagc
tcagcaccggggacccggctccctctccccgcggctctagacgccgacaccggctcctac
tcggtgcggggctacgagctctcggtgaacggtcacttggagctggagctgtcggacggt
gcaggcagcggcggggtccagcagccggtaccggcaccgacgctgctgttggtgaagcct
cttgaccgggagagtgaggccgagctcagcctgaagctgagagcccgggacgggggtaat
ccacctcggagcggggaggcccggctccgggtgcgggtcctcgatgagaacgataacgct
ccggcctttgggagcggctccttggagctcgagctgcgggaggacacggccccgggttcg
ctgctgctgcaactcgaggcccgggacccggaccaaggcctaaacggcgagctccggttc
accttcagcccgagggtcgaggcggacgctcggcgcctcttccgcctggagccgcgctcc
ggccgcttgagcctgaacgcgcagctcgaccacgaggcgcgcgcccgcttcgagctggag
gtggaggcgcgcgaccgcggcgccaggccgcgcgcctcgagctgccgggtggcggtgcgc
gtgctcgacgtcaacgacaacgcgcccgagatccgcgtgagcgcgctcggtcccggtccc
ggagaggcctcgggcctcgcgtccatcaccgaggcggcggaaccgggtagtttcgtggcg
ctggtgagtgtgtgggaccgggattcaggagctaacggccgcctctcggtatcactgctc
gggccccgggagttacacttacggccggcttatggcattaaccactacatgatcgtgacg
gcggaacggctcgaccgggagcgggacaccgagtataacgtgacgctggtggccgaggac
caaggcccggatccccgccggacggtcaggcctttcaccgtcaccgtcaccgatgtgaac
gacaacgcgcccgccttcccccgctccgtctaccgcctgtcgctggcggagaataacctg
cccggggcccagctcggtaccgtccgggcccgtgaccctgacctgggccctaacggccgc
ctcacttaccgcctgctgcagccgcacgaggggccggggccggggcctgggccggggcct
ggcctgcagcctccggccgtcgctgtggagcctcacaccggctccttgtacgcgctccgc
tccttggaccgtgaggagctgcccgagctcgagctgctgctgcaggcgacagacggcggt
tccccgccgctcagcggctccaccaccgtccgcctgatcattaccgaccggaacgacaac
gctccgttcatcactcacccgccgccgcctcctccatctcccgggaaccgctccgccgct
cccgctcccgccaagatggcgctgcccgggggcgcgccccgcggttacctggcggcgcgc
gtgcgggcccaggacgcggacgaggggccgaacggccgcctcagttaccggatcgtgagc
ggggagccgcccgggctcttcaccatccgccccgacaccggggacgtgtacctgggccgc
ccgctctccgtgtcccccgccgggcccgggcccggggccttcagcctggtcgtggccgtt
agtgacggcggcctgcccccgctgtcctccaccgtcaccgtgagcttcacggcggggccc
gggcctcggcccgctccagctccctccggctccccgggaccggcacagcggagctgggac
acctccttcaccgtcatcgcggtgctggccgccggctgcgtggccttgctgctggccatc
gtcggtatcgcctcgacctgcggcaccggagacaagagccggggcggacacggtggcggg
cggccgccccaagccttggacccccggcccgacgctgcccgtcccccgtccccgggcgga
ttgcacagtgacggagattcggaagaggcgaggaagggagtgtctctcctggaaacacag
catcaactccctggcaacactcaggagagctttatgccagagcctgatgtcaatcatgga
gccttttgtacagttgcctttcatcaaaatatcaagacccatgtatgtcctggacaagat
gtattcagcggaaaagacagtgggaaaggagatagtgacttcaatgatagtgattctgac
ataagtggtgatggatcaagaaaaggacatgcagtaattgatcaaaggcagaatggtgtg
ttcccctgtcgtaagaaaagccaaacgccttgcagttctgacccccattacaacttgacc
tctcaaacgacagaatgtggaaaattctcttctcactcaaaacagagctatgtgcttgct
tattcttcaatacctgcaacgttactgcattcatctagtggtgcagtctcttccattcta
caggatcagccattaaaatatactcagcagtatggccacgtaacaaggtcggaacctcaa
acttctgaaagtgttttatctagagaatctggaaggacaggaccctcacttcacccacct
gtgatacagagaccttttaaaacaacttcatcagcatataatgcttccggtcaaagatac
caaaccagttatcttaatacagccctctctgaagtggctacttctttttga
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