Rhincodon typus (whale shark): 109926858
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Entry
109926858 CDS
T06055
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109926858
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109926858
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
IHABP4_N
Motif
Other DBs
NCBI-GeneID:
109926858
NCBI-ProteinID:
XP_048458037
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All DBs
Position
10:complement(32472689..>32505749)
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AA seq
299 aa
AA seq
DB search
LGVRRVGRKPEQQQSQGEGKPGERRPDRRPPPRERRFDRPVEEKADGGEFSSERPVDRDR
PLRGRGRGRGRGRGLGRSDGFDSRGKREFDRHSGSDRSGLKPEDKRGGSGSHNWGTVKDE
LGELDQSAVTEEAPEGDEQQVVDSENKENEVEEVKEEGPKEMTLDEWKAMQDKERAKAEF
NIRKPNEGCDSSQWKKGFVLRKPKTEEKRFESEADVHHLEYTVSADESVLEHHFRKPAND
ITSQLEINFGDLGRPGRGGRGGRGGRGRGGGRSIRGMRPDKSSITVPNVDDPEAFPALA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttaggtgtcagaagggttggcagaaagcctgagcagcagcagtctcaaggtgaaggaaaa
cctggtgaaaggaggccagacagaagaccaccacctcgtgaacgacgctttgatagacct
gttgaagaaaaagctgacgggggtgaattctcctctgaaaggcctgttgatcgtgacaga
ccactgcgtggacgtggaagaggtcgtggccgtgggcgtggcctgggaaggagtgatggt
tttgactcccgtggaaaacgtgaatttgacaggcatagtggaagcgaccgatctggcctg
aaaccagaagacaaacggggtggcagtggatcacacaactggggaacagtaaaagatgaa
cttggtgaacttgatcagtctgctgttactgaagaggcacctgagggagatgagcaacaa
gtagttgactctgagaacaaggaaaatgaagtagaagaggttaaagaagaaggtccgaag
gaaatgaccctggatgagtggaaagccatgcaagataaagaacgagcaaaagctgagttt
aatatccgcaagcctaatgagggttgtgacagcagtcagtggaagaagggttttgttttg
cgcaaacctaaaactgaagagaaacgttttgaaagcgaggcagatgtccatcacttggaa
tatacggtctctgctgatgaatctgttttggaacatcacttccgcaaaccagcaaatgat
ataacttcccagctggaaatcaattttggtgatttgggccgccctggccgtggcggcaga
ggggggcgaggtggccgtggacgtggtggcggcaggagcatccgtggaatgaggcctgac
aagtcaagcatcaccgttccaaatgttgatgatccagaagcttttccagccctggcctaa
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