Rhincodon typus (whale shark): 109926875
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Entry
109926875 CDS
T06055
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X3
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00512
Mucin type O-glycan biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
109926875
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109926875
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109926875
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Gene cluster
GFIT
Motif
Pfam:
Branch
REC102
ParBc_2
Motif
Other DBs
NCBI-GeneID:
109926875
NCBI-ProteinID:
XP_020382323
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Position
3:complement(97274637..97292416)
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AA seq
454 aa
AA seq
DB search
MLYKYLTVKFKLKKIVLLLLTFALPCVLKLLYNHGMVTGSGKTWLVEPFWSTSQYVRNRK
NSKYLQLNLQINCTAIYECSPVEVGKTLEIRKGNIVDLEDEDVELMTSDCDQYLSQRGFR
NNLISEVEKEYPLAFSMVVHKDAIMVERSLKMIYMPQNIYCIHYDQKSSPSFKSAIDNLA
KCFPNVFIASKLELVHYAHISRLQADLNCLSDLLESSVQWKYVINLCGQDLPLRSNFELV
FELKKLNGTNMLESTKPTDTKKDRFIYHHELLDNSNNDGQIFIKTDVVKDPAPHNIEVFT
GSAYFVLSYNFTKYITSSMVAKDFLAWSADTYSPDEHFWASMVRVPGVPGELSRSEADVT
DLQSKVRLVKWSYLEKALYPPCTGTHRRSVCIYGSAELRWLLDYGHWFANKFDSKVDPVL
IKCLELKIRERQNFWTDLNPQKVYVYNHSENFWG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaagtatttaactgtgaaatttaagctgaagaagatagttttactgcttttg
acctttgcactgccctgcgtattaaaactcctctacaatcatggaatggtcacaggttca
ggaaaaacatggttggtcgaacctttctggagcacctctcagtatgtgcgcaatagaaag
aacagcaagtacttgcaattaaaccttcaaattaactgcactgccatctacgagtgtagc
ccagtggaagtaggtaaaacgttagaaatacgcaagggtaatattgttgatctggaagat
gaagatgttgagttgatgacatctgactgtgatcaatacctttcgcaaagaggatttcga
aacaatctcatctcagaagtggaaaaggagtaccctttggcattttctatggtagttcat
aaagatgctattatggtggaaagaagcttgaaaatgatttacatgcctcagaatatatac
tgcattcattatgaccagaaatcctcaccttcattcaaatccgccatagacaacttagcc
aaatgctttccaaatgtgttcattgcatcaaaattggaattggtacattatgctcacatt
tccagactacaagcggatctcaattgcttgtctgatcttcttgaatcatctgtccaatgg
aagtatgtgatcaacttgtgtggccaagatttaccattgcggtccaactttgaattggta
tttgagctgaagaaactgaatggaactaacatgttggaatctacgaagcccactgatact
aaaaaagatcgattcatatatcaccatgagcttttagataattcaaacaatgatggacag
atattcatcaaaactgatgttgtgaaggaccccgcgcctcacaatattgaagtatttact
ggcagtgcctattttgttttgagttacaactttaccaaatacatcacctccagcatggtg
gccaaagattttctcgcctggtccgcagatacctattcaccagatgaacacttctgggca
agcatggtccgggtacctggggtgccaggtgagctctctcgctctgaggctgatgtgact
gatctgcagagtaaggttaggctggtgaagtggagctacctggagaaggcgctataccca
ccctgcacaggaactcatcgccgcagcgtctgcatctacggctctgctgagctcaggtgg
ctacttgactatggccattggtttgcgaataaatttgactccaaagtagaccctgtatta
attaaatgtttggaactgaagattagggaacgccagaacttttggacagatttgaatcct
caaaaggtctatgtttataatcatagtgaaaacttttggggctga
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