Rhincodon typus (whale shark): 109926956
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Entry
109926956 CDS
T06055
Name
(RefSeq) heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
rtp04010
MAPK signaling pathway
rtp04141
Protein processing in endoplasmic reticulum
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109926956
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109926956
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109926956
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109926956
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109926956
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109926956
03009 Ribosome biogenesis [BR:
rtp03009
]
109926956
03110 Chaperones and folding catalysts [BR:
rtp03110
]
109926956
04131 Membrane trafficking [BR:
rtp04131
]
109926956
03051 Proteasome [BR:
rtp03051
]
109926956
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109926956
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109926956
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109926956
Spliceosome [BR:
rtp03041
]
Complex B
Other components
Prp19 complex
109926956
Complex C
Prp19-CDC5 complex
109926956
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109926956
Chaperones and folding catalysts [BR:
rtp03110
]
Heat shock proteins
HSP70 / DNAK
109926956
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109926956
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109926956
Proteasome [BR:
rtp03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109926956
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109926956
Exosome [BR:
rtp04147
]
Exosomal proteins
Proteins found in most exosomes
109926956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
DUF1464
Hydantoinase_A
Stathmin
Motif
Other DBs
NCBI-GeneID:
109926956
NCBI-ProteinID:
XP_020382438
LinkDB
All DBs
Position
27:14252203..14265809
Genome browser
AA seq
643 aa
AA seq
DB search
MSSKGTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPQNTIFDAKRLIGRRYDDATVQTDLKHWPFKVINDSSRPKVEVQHKGETKTFYAEE
ISSMVLAKMREIAEAYLGKSISSAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTA
AAIAYGLDKRVGTECNVLIFDLGGGTFDVSILTIEDGVFEVKSTAGDTHLGGEDFDNRMV
NHFIEEFKRKYKKDISGNKRAVRRLHTACERAKRTLSSSSQASLEIDSLFEGIDFYTSIT
RARFEELNSDLFRETLEPVEKALRDAKMDKSRIHEIVLVGGSTRIPKIQKLLQDLFSGKE
LNKSINPDEAVAYGAAVQAAILCGDVSETVQDLLLLDVTPLSLGIETAGGVMTTLIKRNT
TIPTKQTQIFTTYSDNQPGVLVQVFEGERAMTKDNNLLGKFELIGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIDRMVNEAEHYKADDEAQRLRITA
KNTLESYAYSVKSTVEDDNIKGKLSEDDKQKVLNKVKETLDWLDRNQMAEKDEFEFHQKE
LEKVCNPVIAQLYQSGAAPGPGGFPPGAASSPGSAGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaaggtaccccggcggtgggcatcgacctgggcactacctactcctgtgtt
ggagtcttccagcatggcaaggtggaaatcatcgccaatgaccaggggaaccgcaccacc
cctagttatgtggctttcaccgacaccgagagactgatcggggacgcggccaagaatcaa
gtggccatgaacccccagaacaccatattcgatgccaagagactgatcggcagaagatac
gacgatgctactgtgcagaccgacctcaaacattggccttttaaagtgatcaatgactcc
tccagacccaaagttgaggttcagcacaagggtgaaactaagaccttctacgcggaagag
atttcctccatggtgttagccaagatgagagagatcgcagaggcttacctgggaaagagc
atctcgagcgcagtcatcacggtccccgcttatttcaacgattcccaacgccaggcgacc
aaagatgcagggactatcgccgggctcaatgtcctcaggattattaatgagcccactgca
gccgccatcgcctatggcttggacaagagggtaggaacggagtgcaatgtcctcatcttc
gatttgggtggtggaacctttgatgtgtctattcttacaatcgaggatggtgtctttgag
gtcaaatccacagctggagacacacaccttggtggtgaggattttgataaccgtatggtt
aaccacttcattgaagagttcaagcgcaaatacaagaaggacatcagtggaaataagcga
gctgtgcgtcgcctccatactgcctgtgaacgggcaaaacgaactctgtcctccagctcc
caggccagcctggagatcgactccctgtttgagggtatagacttctacacctccattact
cgggcacggtttgaggagctgaattctgatctcttccgagaaaccctggagcctgtggag
aaagctctaagagatgccaaaatggacaagagtcggatacatgagattgtgcttgtgggg
ggatctactagaattccaaagatacagaaacttttgcaggacctatttagtggaaaggag
ctgaacaaaagcatcaatcccgatgaggcagtagcttatggggccgctgtacaagcagcc
attctatgtggagatgtctcagaaacagtgcaggacttgctccttctggatgtgacaccc
ctgtcactgggcattgaaacagctgggggagtgatgacaactctaatcaagagaaacaca
actattcccacaaagcagacccaaattttcactacatattcggacaaccaacctggtgtt
ctggtccaggtgttcgagggtgagcgagccatgaccaaagataataatcttctgggcaag
tttgagttgataggaatcccaccagcacctcgaggtgtccctcagatagaggtcactttt
gatattgatgccaatggaatattgaatgtttctgctgtggacaagagtactggtaaagag
aataaaatcaccatcacaaatgacaaggggcgtctgagtaaggaggatattgatcgcatg
gtaaatgaggcagagcattacaaagcagatgatgaagcacaacgactgcggataactgcc
aagaacacccttgaatcttacgcatacagcgtgaaatccacagtggaagatgataacata
aagggtaaactgagcgaggatgacaaacagaaagttttgaacaaggtaaaggagaccctt
gattggctggatcgaaaccaaatggctgaaaaagatgagtttgagtttcatcagaaggag
ttggagaaggtgtgtaatcctgttatcgctcagctgtaccagagtggtgctgcccctggt
ccagggggatttcctccaggagcagcaagcagcccaggatctgctggaccaactatagag
gaagtggactaa
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