Rhincodon typus (whale shark): 109927021
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Entry
109927021 CDS
T06055
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04620
Toll-like receptor signaling pathway
rtp04621
NOD-like receptor signaling pathway
rtp05132
Salmonella infection
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109927021 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109927021 (myd88)
04621 NOD-like receptor signaling pathway
109927021 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109927021 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
109927021 (myd88)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR_2
Death
TIR
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-GeneID:
109927021
NCBI-ProteinID:
XP_020382505
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All DBs
Position
4:complement(92777284..92795994)
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AA seq
291 aa
AA seq
DB search
MATCEKKNSESADSLGSIDYFSIPLITLNFSVRKKLALYLNPRTVVAADWTVLAEEMGFE
YLEIKNYERLDNPTEKLLEDWQVKDGSSVGKLMELLQKIQRDDILEDVTPDIEASCRRYL
NKPVQVQSVDSSEPKTPSPGGITIRDDPTGAAPEFFDAFICYCQADIEFVHEMIKQLEQS
ECKLKLCVFDRDVLPGSCVWTITSELIEKRCKRMVAIISDDYLVSNDCDFQTKFALSLSP
GARDKRLIPVKYKQIKREFPSILRHITLCDYTNPSTKAWFWKRLAKALSQP
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctgtgagaagaaaaatagtgagtctgctgattcgttggggagcattgactac
ttttccatccctctgattaccctgaacttctcggtaaggaagaaactagctctgtacctc
aatccaagaactgtagtggcagcagactggaccgtgctggccgaggagatgggctttgag
tatctggaaattaagaactacgaaaggttagacaatcccaccgaaaaactgttggaagat
tggcaagtcaaggatggctcttctgtgggcaaattaatggagttactccaaaagatacaa
cgtgacgatatccttgaagatgtcacaccagatattgaagcaagctgtcgacgatacctt
aataaaccagttcaagttcaatcagtggatagcagtgagcccaagactccaagtccagga
ggaataacaataagagatgacccgacaggagctgcacccgagttctttgatgctttcatt
tgctattgtcaagctgatattgagtttgtccatgagatgatcaagcagcttgagcagtcc
gagtgcaaactgaagttgtgtgtatttgaccgcgatgtgctgccagggtcgtgtgtctgg
accatcaccagcgagcttattgagaaaagatgtaaaagaatggtggcgataatctctgat
gactatttggtcagtaatgattgtgactttcaaacgaagtttgctctgagtcttagtcca
ggtgcccgagacaagcgcctgatccctgtcaagtacaagcagatcaagagggaatttcca
agcattctccgtcacatcacgttgtgtgattacacaaacccaagcaccaaagcatggttc
tggaagaggctcgctaaagcactctcacaaccgtga
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