Rhincodon typus (whale shark): 109927103
Help
Entry
109927103 CDS
T06055
Symbol
pgap6
Name
(RefSeq) post-GPI attachment to proteins factor 6 isoform X1
KO
K24576
transmembrane protein 8A/B
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109927103 (pgap6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3522
DUF7555
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109927103
NCBI-ProteinID:
XP_020382593
LinkDB
All DBs
Position
21:33196707..33251018
Genome browser
AA seq
778 aa
AA seq
DB search
MEEGPLKPRSRSGPTAMALLPSRCLACFLTLLLLDCGRAGAAGPTYVSEYYSQTPQKLSL
YSWYGNARLFVFRVPENTLLMKWILQASKGKGLECQNTNITVHFRAGAPPVINPLQTKFG
MDTVVPPSFNFTIPLMSAVQSSTTLNISNPVSGDWFVAAHLPNDDGKIEVKGFSTKCSYM
FQPQMLVQRLINVPVLEPNTSLTLILSSVNQVSHLKIFIPEHTVELTIHLKNCAINTRTV
ETCPVFLLIGSNALPNSHLKIVNCSESIVCRETLDSPPWMKWLQLTVESSNPNWIVTFEI
EAYLTVCEPVDAGSLLTLFNNFTLSSNGTVIRNLDMLGVYVKPNKTEPSGNSISCFRNQP
VLREDVDVISVRFFVLNGPETLVTSEYPIILPLKLNTGRDNGGTIMLNLQLNKTSLSNEN
ATVFACLSAGSPVMSLDVNSLSCGEALSWGYLLKMNSSTLSRSLHVPYPETNRWYLTLQI
LCDKSNQTCGKISALVTVSAILNPCVGDCGVYGECRLLQTHGYLYAACVCKAGWNGWSCT
DDTNAQSYRQQLLATLLLTLSNLMFIPPIVIAVHRCYFVEASVYFFTMFFSTFYHACDQP
GIAVMCIMEYDTLQYCDFLGSVVSVWVTILCMARLKSLLKYVLFIIGSLLIAMSMQLDRR
GLWNLLGPCLVALCIMVTAWVFRGVKQRHCYPPTWKRWVFFLLPGIGAALIAIAVYGFLE
TRDNYYYTHSIWHILVAGSVVFLLPPGKKHTNLWIWKQKFTCGYQLCSDVKEDLYVVC
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggtcctttgaaaccaaggagccgctccggtccgacagcgatggcattactc
ccgtcgcgatgtctggcctgcttcctgactctccttctgctggactgtggtcgggctggt
gctgctggtccaacttacgtttctgaatattactctcaaactcctcaaaaactttccttg
tacagctggtatggaaatgcacgtctctttgtcttccgagtgccagaaaatacactgttg
atgaaatggattttacaagcctcaaaaggaaaggggctggagtgccaaaatactaatatt
actgtccattttcgggcaggtgccccaccagtaatcaatccattacaaaccaagtttgga
atggacacagttgttcctccttcattcaacttcactattccattgatgtctgcagtgcag
agtagtacgactttgaatatttctaatcctgtttcgggtgattggtttgtagctgcacac
ctaccgaacgatgatggtaaaattgaagtaaagggtttctcgactaagtgttcctacatg
tttcaacctcagatgcttgttcaacgattgattaatgtgcctgttcttgaaccaaacact
tcacttacactgattctttcttccgtcaatcaggtttcacacttgaaaatttttatcccc
gagcacactgtggaactgaccattcatcttaaaaactgtgctatcaacacccggacagtg
gaaacttgtcctgtcttcctgttaataggatcaaatgcattacctaactcccacttgaag
attgtaaattgcagtgaaagtatagtgtgtagagaaacactggattctccaccatggatg
aaatggttgcaactcactgttgaaagtagcaaccctaactggatcgtcacctttgagatt
gaagcttatttaacagtatgtgaacctgttgatgctggatcccttcttacactgtttaat
aacttcactctatcaagcaacggtacagtaatcagaaatctagatatgttgggagtatat
gtaaaaccaaataaaactgagccaagtggcaatagcatatcatgttttcgtaatcaaccc
gttcttcgagaagatgtggatgttatctctgtaagattttttgttttgaacggaccagaa
acactagtcacctctgaatatccaataattcttccgctgaagttgaatacaggaagagac
aatggtgggaccatcatgttgaatttgcagttaaataagacttcattatccaatgaaaat
gcaaccgtgtttgcctgtttaagtgctgggtctcctgtgatgtccctagatgtcaattcc
ctaagctgcggagaagctttatcttggggatacttgcttaaaatgaattcttcaacatta
tcaagatcccttcatgttccttacccagaaactaaccgttggtatctcactttgcaaatc
ctgtgcgataaaagcaatcagacctgtggcaagatttctgctctggtaactgtatcagct
attttgaatccctgtgttggggattgtggtgtatatggagagtgcagacttcttcaaact
catggatatctttatgctgcatgtgtttgcaaagctggctggaacggatggagctgtaca
gatgataccaacgcccagtcatacagacagcaattgctggcaacactcttgttaactttg
agtaatctcatgttcatccccccaattgtgattgctgtgcatcgctgttattttgtagaa
gcttccgtgtatttcttcaccatgtttttctcaacgttttatcatgcatgtgatcaacct
ggaattgctgtcatgtgcattatggaatatgacacactgcaatactgtgatttccttggt
tcagtagtatctgtgtgggttacaattctgtgtatggcgaggttaaaatccctccttaaa
tatgtactttttattattggttccttattgattgccatgtcaatgcaactagaccgccgt
ggtctttggaacttgttgggcccatgtcttgttgccctgtgcatcatggtaactgcatgg
gtgtttcgtggcgtgaagcaacgccattgctatcctccaacatggaaacgttgggtcttt
ttcttgttaccaggaataggtgcagcattaattgctattgcagtgtatggatttctggaa
acaagagacaactattactatacacatagcatctggcatattcttgtagctggaagtgtg
gtatttttgttgccaccaggtaaaaaacacacaaacctctggatttggaagcagaaattt
acatgcggataccagctttgttctgacgtaaaagaagacttatacgttgtttgttga
DBGET
integrated database retrieval system
