KEGG   Rhincodon typus (whale shark): 109927129
Entry
109927129         CDS       T06055                                 
Name
(RefSeq) protein LSM14 homolog B-A isoform X3
  KO
K18749  protein LSM14
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109927129
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109927129
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 109927129
NCBI-ProteinID: XP_020382629
LinkDB
Position
19:16058474..16087764
AA seq 430 aa
MSGGTPYIGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPVAPRDE
IYEYIIFRGSDIKDITVCEPPKPQPQDPAIVQSSLSASSNTSFQPPTSYSPFRSMTPYNQ
FAGGGSLVGQQYGSSVGLGCSTPTQITTVSHSSSTDSPPSPQPAFTELEIPPDPAPLQKS
QLIPQAATGFPFLPPRQSPMVEQGVQTSPIEGLNQKNLQQDKIPASINQQSVGPEQRKVV
QPTPQPSQSQVNDENKKPQPQRRRSGNRRVRNRGRGQNFSGNNKEATMKFEGDFDFESAN
AQFNKEEFEKEFQNKLKIKDDQVHKGDLGDQEEKGDSNVESPSTEGNKEEPPLGPNCYYD
KTKSFFDNISTEPKTRRTWAEERKLNTETFGISAKFLRGRGFRGGFRGGRGRGGGRRTSS
MPRNSGGSRV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgagcggcgggacgccgtacatcggcagcaagatcagccttatctctaaggcgcagatc
cgctacgagggcatcttgtataccatcgacacggacaactccacggtggccctggccaag
gtgcgatcattcggaacagaagaccgccccacagacagacctgtcgccccaagagatgaa
atctatgaatatatcatcttccgtggcagtgatatcaaagatattactgtctgcgaacct
cccaaaccacaaccccaagatcctgcaatagtacagtcttcgttgagtgcttcgtcaaac
acttcatttcagcctccaacgtcatacagtccattccgtagtatgactccatataaccag
tttgctggaggaggatctctggttggacagcagtatggcagctctgtgggtctaggatgt
tcaacacccacccaaatcacaactgtttctcactcctccagtactgatagtcctccctca
ccacaaccagcctttacagagcttgaaataccacctgatccagcacccttgcagaaaagc
caactgattcctcaggcagctactggttttccgtttttgccaccaaggcaaagtcctatg
gtagaacaaggtgtgcagacgagtcctatagagggtcttaatcagaagaacttgcaacag
gacaaaatccctgccagcataaatcagcagtctgttggaccagagcaaagaaaagttgta
caaccaacgccacagccaagtcaatctcaagtgaatgatgaaaataaaaaacctcagcct
caaaggaggagatcaggcaacagaagagtcaggaaccgtggaagagggcaaaacttttct
ggaaacaataaagaagcaacaatgaaatttgaaggcgactttgattttgaaagtgcaaat
gctcaatttaataaggaggagtttgaaaaggagttccaaaacaaactcaaaattaaagat
gaccaagtccataaaggagatcttggtgatcaagaagaaaaaggagactcgaatgttgag
tcaccaagtactgaaggaaataaagaagagccacctcttggacctaactgttactatgac
aaaacaaaatcattctttgataatatttcaacagagccaaagacaaggcgtacgtgggct
gaagaaagaaaacttaatacagagactttcgggatctcagctaaatttcttcgtggtcgt
ggttttcgtggaggcttccgtggaggaaggggccgtggaggagggagaagaacctcttca
atgccaagaaatagtggcggtagcagggtttaa

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