Rhincodon typus (whale shark): 109927163
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Entry
109927163 CDS
T06055
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109927163 (yod1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109927163 (yod1)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C88
109927163 (yod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
109927163
NCBI-ProteinID:
XP_020382671
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MLRLRCKAKNGTHLMQGLTSVSNVQELKDKVEELTGIPSALQKIMVGFPPSSLDLRNGEL
PLKDCPIKSGDTLIVEEESDTLKIKASVSKFFAKSSDKDTFPQLIRHVVPADNSCLFTSI
NYVVEGGVCEPSCAPEMRSLIAQIVASDPDSYTEAVLGKSNWDYCNWIQQNDTWGGAIEI
SLLSKFYQCEICVVDTQTVRVDRFGEDVGYTKRVLLIYDGIHYDPLERRFEDPETPPQTI
FSTADDVVLAQALELADEARRKRQFTDLNKFTLRCVICQKGLVGQVEARDHAKETGHTNY
GEV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctacgtttacgatgtaaagcaaagaatggaactcatttgatgcaagggctgacttca
gtatctaatgtccaagagttaaaagataaagtggaagaactaactggaattccaagtgca
ctgcaaaaaattatggtgggatttcctccatccagtctagatcttcgtaatggagaactg
cctctcaaagattgtcctatcaaatctggtgatactttgattgtggaagaagaaagcgat
actttgaaaattaaagcctcggtgtcaaaattttttgctaaaagttcggataaagatact
ttcccacagctgatccggcatgttgtgcctgcagataattcgtgtctcttcacaagcatc
aactatgtggtagaaggaggtgtttgtgaaccatcctgtgctccagaaatgcgaagcttg
atagcgcagattgtagcaagtgatcctgattcctacactgaagctgtactaggaaaatct
aattgggattactgcaactggattcaacaaaatgacacttggggaggagccattgaaatc
tctctcttatccaagttttaccagtgtgagatttgtgttgtggacacacaaactgtacga
gtagacaggtttggagaggacgtaggttacacaaaacgtgtcctcctgatttacgatgga
atccattatgacccattagaacgtcggtttgaagatcctgaaacacccccacaaaccatc
ttctctactgcagatgatgttgtgcttgcccaagccctggagttggcagatgaagcaaga
aggaaacgacaatttactgatctcaataaattcaccttgcgatgtgtcatctgccaaaag
gggctggtgggtcaggtagaggctagggaccatgccaaagagactgggcacaccaactat
ggggaggtatga
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