Rhincodon typus (whale shark): 109927171
Help
Entry
109927171 CDS
T06055
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03022
Basal transcription factors
rtp03420
Nucleotide excision repair
rtp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109927171 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
109927171 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109927171 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
109927171 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109927171 (cdk7)
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109927171 (cdk7)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109927171 (cdk7)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
109927171 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
109927171 (cdk7)
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: CMGC group
CDK family
109927171 (cdk7)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109927171 (cdk7)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
109927171 (cdk7)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109927171 (cdk7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
Motif
Other DBs
NCBI-GeneID:
109927171
NCBI-ProteinID:
XP_048451064
LinkDB
All DBs
Position
3:complement(101663023..101707534)
Genome browser
AA seq
345 aa
AA seq
DB search
MAVDVRSRAKRYEKLDFLGEGQFATVYKAKDKNTDNIVAIKKIKVGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYVLM
TLQGLEYLHLHWILHRDMKPNNLLVDENGILKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRTPFLPGDSDLDQLTKIFEALGTPTEEQWPGM
TSLPDYISFKSFPGTPLEHIFSAAGDDLLELLQDLFTFNPCARITATQALKKKYFSNRPG
PTAGPQLPRPNCSTEVLKEQEAKAGFKRKRTENMEQGGLAKRLIF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatgtccgctccagggccaagcgttacgagaagctcgacttcctgggcgag
gggcagtttgccactgtttataaggcaaaagacaagaacacagacaacattgttgcaata
aagaagattaaagttgggcacagatcagaagctaaagatggtattaatagaacagccctt
cgagaaatcaagttgctacaggaactcagtcacccaaatattataggacttcttgatgca
tttggtcataaatccaacatcagtcttgtttttgactttatggagaccgatttagaggta
ataataaaagataccagcctcgtgctgactcctgctaacataaaagcatatgtgttaatg
acactccagggtctagaatatcttcatttacactggattctacatagggatatgaagccc
aacaacttattagtggatgagaatggaattcttaaacttgctgattttggtttagccaag
tcatttggaagtcccaatagagtgtatactcatcaggtagtaacaaggtggtacagatca
ccagagttgttatttggagccagaatgtatggagttggagtagacatgtgggcagttggt
tgtatattagctgagctactacttaggacaccatttttacctggggactctgacctagat
cagctgacaaaaatatttgaagctttgggcactccaacagaagaacagtggcctggaatg
accagccttccggactatatctcatttaagagttttcctggaactccactcgagcatata
tttagtgctgctggggatgacctactggaattgctacaagacctgtttacatttaatccc
tgtgcaagaataacagctacccaggcactaaagaagaagtattttagtaaccgccctgga
ccaacagcagggcctcaacttccccgacccaactgctcaacggaagtcttaaaagagcaa
gaggctaaggcaggtttcaaacgtaaacgaactgaaaacatggagcaaggtggcctggct
aagagattaattttctga
DBGET
integrated database retrieval system
