Rhincodon typus (whale shark): 109927186
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Entry
109927186 CDS
T06055
Symbol
snx9b
Name
(RefSeq) sorting nexin-9b isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109927186 (snx9b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109927186 (snx9b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109927186 (snx9b)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109927186 (snx9b)
Macropinocytosis
Sorting nexins
109927186 (snx9b)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109927186 (snx9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
Motif
Other DBs
NCBI-GeneID:
109927186
NCBI-ProteinID:
XP_048457124
LinkDB
All DBs
Position
9:complement(32699401..32908618)
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AA seq
618 aa
AA seq
DB search
MATKARVLYNFTAEPGNAELTVKEGEIITIVNWDVGGGWCEASNALGMTGLVPTDYVEMI
SESGGSTVPFGPSGKAQSTGTNLAAFDPFSSSQAGYSGSPVFGSSFTPNNQANNADDPWL
NWNTTSAGTWSTNNAGNSGNAWSAVNWPTNTDSSNAQKNSTADNWDMTGYGHPQAYQGPG
AAEDDDWDDDWNESKPSPNILPRTESETAETGLARGAPRNNSVKMPRSRFPTFIKHGPEV
YLLSKQPVKTTEKITIHKGEVGPVWEYPTSSLSCVVADPKKGSKLYGLKSYIEYQVTPNN
TNRSVNHRYKHFDWLCERLLIKFGSAIPIPSLPDKQVAGRFEEEFIKMRMERLQNWMNRM
CHHPVISNSEVFQLFIACRDEKEWKLGKRKTEKDDVVGIMIFSTVEPPAEDISLLEAEQK
VEMFSKFTKAMDDGVKELLGVGQEHWKSCAGALPKEYQKMGKALQNISQVFATSGYEGES
ILTDPLTEVGKTFEEIASIFAEQPKKDLHYLMETNQEYKGLLGCFPEIISVHKGAIEKAK
EGDKLVALNKVTPEEKNTMVNRIGTMSYTFQAEMNHFHNNRIYDYNSVIQLYLQQQVEFH
ETIAAKLKQALTHFTVQQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaaggcccgtgttttgtacaactttacagctgaacctggaaatgccgagctg
actgtcaaagaaggcgaaatcatcactattgtcaattgggatgtcggtggtggatggtgt
gaagcatcaaatgctctgggaatgactggacttgttccaacagactatgtggagatgatt
tcagaaagtggcggtagcactgtaccctttggacccagtggaaaagcacagagcacagga
acaaatctggcagcttttgatcccttctcatcaagtcaagctggctatagtggaagtcca
gtgtttggaagttcattcaccccaaacaatcaggcaaacaatgcagatgatccctggttg
aactggaatactacttcagctgggacctggagcactaataatgcaggtaacagtggaaat
gcctggagtgcggtgaactggccgacaaatacagacagttcaaatgcacagaaaaatagc
actgcagacaattgggacatgactggctatggtcatccacaggcctaccagggcccaggt
gctgcagaggatgatgactgggatgatgattggaatgagtccaaaccatctccaaatatt
cttcctcgcacagagtctgagacagcagagactggtttggctcgtggagctcctcgcaac
aattctgtgaaaatgccacgcagtaggtttccaacctttatcaaacatgggcctgaggtc
tatctactttcaaagcaaccagtaaaaactactgaaaaaattacaatccacaaaggagaa
gtcggtccagtttgggagtatcccacttcctctttgagttgtgtggtggctgacccaaaa
aagggatccaagctgtatggattgaagagttatattgaatatcaagtgacgcccaataac
actaaccgatcagtcaaccacagatataagcattttgactggttatgtgagcgtctgctc
atcaagtttggttctgccattccaattccttctcttccagataaacaagttgcaggacgt
tttgaagaggaattcatcaaaatgcgaatggagaggttgcaaaattggatgaatagaatg
tgccatcatcctgtcatttcaaacagtgaggtgttccagctcttcatcgcttgccgggat
gaaaaggaatggaaattaggaaagaggaaaactgaaaaggatgatgttgttggtatcatg
atcttttcaactgtggagccaccagcagaggatattagcctacttgaggcagagcagaag
gttgaaatgtttagtaagtttacaaaagccatggatgatggggttaaagagctgctcggt
gtgggacaggaacattggaaaagctgtgcaggagcactgcccaaggaatatcagaagatg
ggaaaagctttacaaaacatttcacaggttttcgcaaccagtggttatgaaggtgaatcc
attttgacagatcctttaactgaagtaggaaagacatttgaagaaattgccagcatcttt
gcagaacagcccaaaaaggacttgcattatctgatggaaacaaaccaagagtacaaggga
ttactaggatgttttcctgaaatcattagcgtacataagggagctatagagaaggcaaaa
gagggtgacaaactggttgctttgaataaagtgacaccagaggaaaagaataccatggtg
aatcgtattggaacaatgtcctacacattccaagctgaaatgaatcacttccacaataat
cgaatttatgattacaattctgtaatccaactgtacctacagcagcaagttgagtttcat
gagacgattgcggcaaagctgaagcaagcattgacccattttacagtacaacagtaa
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