Rhincodon typus (whale shark): 109927201
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Entry
109927201 CDS
T06055
Symbol
cntfr
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha isoform X1
KO
K05059
ciliary neurotrophic factor receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109927201 (cntfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
rtp04050
]
109927201 (cntfr)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
109927201 (cntfr)
Cytokine receptors [BR:
rtp04050
]
Interleukin receptor families
IL6/12 receptor family
109927201 (cntfr)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
Receptors
109927201 (cntfr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FN3_IL27B_N
Ig_3
ig
fn3
I-set
Ig_5
Ig_2
Ig_4
FN3_DSCAM-DSCAML_C
V-set_CD47
Adeno_E3_CR1
PKD
LIFR_D4
Motif
Other DBs
NCBI-GeneID:
109927201
NCBI-ProteinID:
XP_020382735
LinkDB
All DBs
Position
1:complement(39489884..39876828)
Genome browser
AA seq
357 aa
AA seq
DB search
MANIVASAYCVVLAVLVMCAQGHGGQEGRTYYRRIGSNVTLQCETSDSHTPVIWRFNGHV
IGHKDDQLLQGSNLTLRNIDTAQSGTYSCHEKHSGRLKNQIIIQAGNPPVSPTILCRSNA
YPETFYCTWQLSSPTYIPTEFDVSVRHGEKEIETIMDPNHKNRCNIRFLEMFSTSKYTVT
VTARNALGSNSSSTSFNENTIVKPDPPEIIEVNTIPDSPRRLEVKWRNPLTWPEPDSIPL
KYFLRYKPVILDDWQHVEVTDVPFHTITDAYMGKEHIIQVAAKDSEVGTWSEWSKAVHAT
PWTPLVPTNEPEKKPNNVSEPFHITTPSVRANRQNNSSMRMESSATLLLGIMVVLFI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatattgttgcttctgcctactgtgtggtgctggctgttctggtgatgtgtgct
caaggccatggtggacaggaaggaaggacatactatagaagaattggcagcaatgtaacc
ctgcagtgtgagacatctgacagccatactccagtgatatggaggtttaatggacatgtg
ataggccacaaggacgaccagcttcttcaaggctctaatcttaccctccgaaacatagat
acagcacaaagtggaacctatagctgccatgaaaagcacagcggaaggttgaaaaatcaa
ataataatccaagctggaaatcctccagtgtcaccaactatactatgcagatccaatgct
tacccagagacattctactgcacatggcaactgtcaagtccaacttacattccaactgaa
tttgacgtctctgtaaggcatggggagaaggaaattgagacgattatggatccgaaccat
aaaaataggtgcaacatcagatttctggaaatgttttctacaagcaaatacactgtgact
gtgacagcaaggaatgcactgggatccaactcttcatccacctcatttaatgagaatact
atagtgaaaccagaccctccagagataattgaagtcaatacaattcctgactcccctcgc
agactggaagttaaatggaggaacccattaacatggccggagccagattcaattcccctg
aagtacttcctgaggtataagccagttattctggatgactggcaacatgttgaggtgaca
gatgttccatttcatacaattactgatgcatatatgggaaaagaacacattatacaagtt
gctgctaaggacagcgaggttggcacttggagtgaatggagtaaagctgtacatgctaca
ccatggacaccactggtgccaacgaatgagcctgaaaagaaacccaacaatgtttcagaa
ccttttcatattacaactccaagcgttagagccaaccggcaaaataacagttccatgaga
atggaatcatccgcgacactgctccttggcataatggtggttttatttatctga
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integrated database retrieval system
