Rhincodon typus (whale shark): 109927241
Help
Entry
109927241 CDS
T06055
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109927241 (sox9a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109927241 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109927241
NCBI-ProteinID:
XP_020382797
LinkDB
All DBs
Position
23:14485151..14489484
Genome browser
AA seq
474 aa
AA seq
DB search
MNLLNPFLKMTEEHEKTLSDVPSPTMSEESSDSPCVSGAGSDAENGKPGENSPDELRAQS
LDSKKDEDDKFPACIREAVTQVLKGYDWTLVPMPVRVNGSSKTKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRR
RKSVKNGQGESEEGAEQTHITPNALFKALQADSPHSASSLSDVHSPGEHSGQSQGPPTPP
TTPKTEVQPGKPDLKREGRPLQEGGRQPHIDFSNVDIGELSSEVMSNIETFDVNEFDQYL
PPNGHPGVPVTHNGHAQNAQATYTGSYGISSTSVTQTAHPWLSKQHSMTSLASEQGQQQR
THIKTEQLSPSHYNEQQHSPQQINYGSFNMQHYSSSYPSIPRTQYEYSDHQSTNSYYSHA
AGQTTGLYSTFAYMSPSQRPMYTPIADTTGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcaatcccttcctgaaaatgacagaagaacacgagaagactctctccgac
gtgcccagcccgaccatgtccgaggaatcgtccgattccccgtgtgtatccggggctggc
tcggacgctgagaacggcaaaccgggcgagaacagcccggacgagctccgcgctcagagc
ctggattccaagaaagacgaagacgacaagttcccagcgtgtatccgggaggcggtgacc
caggtgctgaaaggatacgactggaccctggtgcccatgcccgtccgcgtcaatggctcg
tccaaaaccaaacctcatgtcaaaagacccatgaacgccttcatggtgtgggctcaagcg
gcgcggaggaaactcgccgaccagtaccctcatctacacaacgccgagctcagcaaaacc
ctcggcaaactctggagactgctgaacgagggcgaaaagcgtcctttcgtggaggaagcc
gagcgcctgagagtacaacacaaaaaggaccatcctgactacaagtaccagccgaggcgg
aggaagtcagtgaagaacgggcagggagagagcgaggaaggagccgagcaaacccatatc
acccccaacgccttgttcaaagccctgcaggcggactccccacattccgcctccagcctg
agcgacgtacattcccccggagagcactcagggcagtctcaaggaccaccaacacctccc
accactcccaagacagaagttcagcccggtaaacctgatctgaagcgtgaaggtcgcccc
cttcaggaaggagggagacagcctcacattgatttcagcaatgtggacattggagaactg
agcagcgaagtcatgtcgaacatagagactttcgatgtcaacgaatttgaccagtacctc
ccacccaacgggcatcctggagttccagtcacccacaatggccatgcacagaatgctcag
gccacctacacaggcagctatgggattagcagcacttcggtcacccagactgcccaccct
tggttgtccaagcagcattcaatgaccagcctcgccagtgagcagggacagcagcagagg
acacacatcaagacagagcagctgagccccagccactacaatgagcagcaacattcgcca
caacaaatcaactacggctccttcaatatgcaacactacagttcatcttatccatccatt
cctcgcacccagtatgagtattcagaccaccagagcaccaattcctattacagccatgct
gcggggcagaccacaggcctgtactccaccttcgcctacatgagtccatcccaacgcccc
atgtacacacccattgccgacaccacaggagtcccttccattccccaaacccacagtcca
cagcactgggagcaaccagtctacacacagctgaccagaccttaa
DBGET
integrated database retrieval system
