Rhincodon typus (whale shark): 109927245
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Entry
109927245 CDS
T06055
Name
(RefSeq) myomesin-2-like
KO
K24495
myomesin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109927245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109927245
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109927245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
ig
Ig_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
109927245
NCBI-ProteinID:
XP_048452711
LinkDB
All DBs
Position
5:94079058..94185041
Genome browser
AA seq
1473 aa
AA seq
DB search
MATKVLPFYQKRHKHYGYDYRNLDSRSVVKKYTSKSSLSKRSRSSLESSSSTYQCTKHSP
CAKRVCQYDEEEVPEYMVPSFRSREGEEEEVKPKPRAFPYGTKLREMEAEISKLKRSAHE
QADMIALTRMEEERTAVQRHVREDSICRAPEFLVQLRSHTVWENSFVKLFCTVQGFPTPL
VRWYKDDVYIDQTSEPAKYRMESYYGAHSLEINRCTTNDTAQYTALAFNIHGEASSSATV
IVKRFRGDEEPYHSVLLPLNLPLLSPPVFTHIDVQYSEKFGVSFGTEGETMILSCRMILT
PNLRRLQPEAVWYRDDVEIKKSKWAAMQFGDCTATLTLPHLNKDDEGLYTLRLITRGGIS
QHSAYLFVRDADAPVVGAPGAPMDVSFYDANKDYVILTWKPPNITKESPVIGYFIDRCEA
ESNNWIQCNDAPIKICKYPVTGLFEGRSYIFRVRAVNKSGISRPSRVTDAVTALDPADLA
RLQTIYFDGSRQIVISQDELEGDIKPPGIPTNVHVAEASRNYIVLSWDPPEPRGREPLVY
YVEKTMAGSSAWQRVNQEIAARSPRLAIFDLAEGKSYEFRVFAVNKFGMSQPSASTGPVV
VQERIEIPSSPSGVRCARNTKHSVVVHWTPSKTAKDLIGYYIDSCLVGTNDWQPCNHKPV
KYTRFVVHGLKNGHKYIFRVKTVNALGLSEVSQESEAITVQAALTAPSSPYGITLLDCTK
DSMTLGWKAPRFTGGSDITGYYMDHREVTDLHWHESNIKPITGRVYKVENLKEGSFYEFK
ISAVNLGGVGIPSDSSRPFKCEAWTMSEPGPVYDLTFCEIRNHSLVILWKAPIFTGHSPV
TGYTVDICETGSDEWRTVTDKAVSTRYLKVTNLEEGKSYIFRVHAVNAAGQGRPSEPSEP
VLIQARPGTKEITSGVDAEGNIFLSFECHDMTNASQFTWGKAYEDITDLSKVHIETDGEK
SKLIFKHPDVSDLGTYTVAVSDTDGVSSSYNLEKEELERLMALSHEIRHPTIPLKSELSY
EVFDKGQVRFWLQTEHVSPNAACKFIVNDLELADSKDHKITFDKSTGMIEMVMEKFTSKN
EGTYTVQIQDGKAKNQSSLVLIGDAFKAVLEEAEFQRKEFLRKQGPHFAEYLHWHVTEDC
VVELICKVANMKKDTVFAWYKDYAAVTPDEPPNPKTGESKLSIPEFSKKEMGEYKMTLKD
DKGQDVTVLDVAGKVYEEIVQEISKISGLSASELKIKCTPEGIRLQSFLKYYMEDVKVFW
YHKDSKIASSEKMRIGGSRDQVWLQICEPNDRDKGKYTMEIFDGKTSYKRHLDLSGEVYA
EAYTEFQRLKAAAFAEKNRGKVIGGLPDVVTIMEGKTLSLTSTVFGDPTPEVTWLKNDKD
LELNDHHNATLEQGKYASLTIKGVTTEDSGKYGINVRNKYGGETIDITVSVYKHGEEIPV
VKRGVQPPEHAKAAHAEPSKPEAPKSSKTGRRK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggtgctgccgttttaccaaaagagacacaaacactacggctatgattac
cgtaaccttgacagccgatcagtcgtgaagaagtacaccagcaaaagcagcttatccaaa
aggtctagatcatcactggagtcttcctcatccacatatcagtgtaccaaacacagtcct
tgtgctaagagggtttgtcagtatgacgaagaagaagttcctgaatacatggtgccttca
tttaggagcagagagggtgaagaggaagaagtcaagcctaaaccaagagcatttccatat
ggtacaaaactacgggagatggaggccgagatttccaaactcaaaaggtctgcccatgag
caagcagacatgatagctctcacgaggatggaagaagaaaggacagctgtgcagagacat
gtccgcgaggattccatatgccgtgctcctgaatttcttgtccagttaagatcccacacc
gtttgggagaactcctttgtaaaattattttgcactgttcagggttttccgactccgtta
gtcagatggtataaagatgatgtctacatagatcaaacaagtgaaccagccaagtacagg
atggaaagctactatggagctcactctttggagattaacagatgtaccacaaatgacact
gctcaatatactgccttggcttttaatattcatggagaggcatcatcgagtgccactgtc
attgtcaaacgtttccgaggagatgaagagccttaccactctgttttgctccctctgaac
ttacctctgttgtcacctcctgttttcacacatatagatgttcaatatagtgagaaattt
ggtgtgagctttggcactgagggagagacaatgatattgtcctgccggatgatccttaca
ccaaaccttcgccgtttacagccagaagctgtgtggtacagagatgatgttgagataaag
aagtccaaatgggctgcaatgcagttcggtgactgcactgccacactgactctacctcat
ctgaataaagatgatgaaggcctatatacattacgtttgataacaagaggtggcatttcc
cagcacagtgcttacctatttgtccgagatgcagatgccccagtggtaggagctccagga
gccccgatggatgtctcattctatgatgctaacaaggattatgtcatcctaacctggaaa
cctccaaatataaccaaagagagtcctgtgattggttatttcattgaccgatgtgaagct
gaaagtaacaactggattcagtgcaatgatgccccaattaaaatttgcaaatatcctgtg
actggcctatttgaaggacgctcctacattttccgtgtgagagcagtaaacaagagtggt
atcagtagaccttccagagttactgatgcggtgacagctcttgaccctgctgatttggct
aggctgcaaacaatttattttgatggaagccgacaaattgttataagccaagatgaactg
gaaggggatataaaacccccaggtatacccacaaatgtccatgtagctgaagccagcagg
aattacattgtactcagttgggatccacctgagccacgtggccgagaaccactggtgtat
tacgttgaaaagaccatggctggcagttcagcttggcaaagggtcaaccaagagattgca
gcaagatccccacgtcttgctatatttgacttggctgaaggaaaatcctatgaattccgt
gtttttgctgttaacaagtttggtatgagccagccatcagcatcgactggaccagttgtg
gttcaggaacgcattgaaattccatcttcgccctctggtgttcgatgtgcaagaaacaca
aagcattcggttgttgtgcattggacgccttcaaaaactgcgaaagacctgattggctat
tacattgattcctgcctggtgggaactaatgactggcagccctgtaatcacaagcctgta
aaatatacaagatttgttgttcatggactaaagaatggacataagtacatcttccgtgtg
aagacggttaatgctttgggactgagtgaggtgtcacaagaatcagaagccattactgtc
caagcggctctgactgccccatcatcaccttatggtataactctccttgattgcacaaaa
gactccatgacactgggctggaaggcaccacggtttactggcggctcggatatcactgga
tactacatggatcatcgtgaagtcactgacttacactggcatgaaagcaacatcaaacca
atcactggaagagtttacaaagttgaaaacctgaaagaaggctctttctatgagtttaaa
atcagtgctgtgaacctgggtggtgttggcatcccttcagattccagtcggcctttcaaa
tgtgaggcatggaccatgtcagaaccaggtccagtttatgacttgacattctgtgaaata
agaaaccattctctggtgatcctgtggaaagcgccaattttcactggccacagtcctgtt
actggctacactgtggatatctgcgagacaggttctgatgaatggagaactgtaacagat
aaagcggtgtccactcgctacttgaaggttactaatttagaggaaggaaagagctacatt
ttccgagtccatgcagtgaatgcagctggtcagggcagaccctctgagccttctgaacct
gtcctcattcaagccaggccaggaacaaaggaaatcacaagtggtgttgatgcagaagga
aatatcttcttgagcttcgagtgccatgatatgactaatgcctcccaatttacctggggc
aaagcctatgaggatataactgatttatcaaaggtccacattgaaacagatggtgaaaag
tccaagttgatcttcaaacatcctgacgtctcagatttagggacatacactgtggcagta
tcagacacagatggcgtctcttccagctataatctagaaaaggaagaattggagcgcctg
atggctttgagccatgaaatcagacatccaacaatcccattgaaaagtgaattatcctac
gaggtttttgacaaaggacaagttcgtttttggcttcagacagagcatgtgtcgccaaat
gctgcttgtaaattcattgtcaatgacttggagctggctgacagtaaggatcacaagatt
acttttgataagtccactggtatgattgagatggtgatggagaagttcacaagtaagaat
gaagggacttacactgtccaaatacaggatggcaaggccaaaaaccagtcgtctctggtt
ttgattggggatgcatttaaggctgtcctagaggaagcggaattccagaggaaagaattc
ttgagaaaacaagggcctcattttgcagagtacttgcactggcatgtgacagaggattgc
gttgttgagttgatatgcaaggtagcaaacatgaagaaggacactgtgttcgcttggtac
aaagattatgcagctgttactcctgatgaaccacctaaccccaagacgggagaaagcaag
ctgtctattcctgagttctctaaaaaggaaatgggcgagtacaagatgacactgaaagat
gacaaagggcaggatgttacggtactggatgtggctggcaaagtgtacgaagaaattgtc
caggaaattagcaaaatcagtgggctttctgcttccgaactgaagataaaatgcacccca
gaaggcatcagacttcaatcctttttgaagtactacatggaggatgtgaaagttttctgg
tatcacaaagattcaaagattgcatcatctgaaaagatgagaattggaggaagcagagac
caggtttggttgcagatctgtgagccaaatgaccgagacaaaggcaaatacacgatggag
atatttgatggcaaaacttcatataaacggcatcttgacctttctggagaggtttatgct
gaggcatacacagaattccagaggctgaaagctgcagcttttgcagagaagaatcgtggc
aaagtaataggaggattgccagatgtagtaactataatggaaggcaagacactgagcctc
acttccactgtctttggagatccaactcctgaggtgacctggctcaagaatgacaaagat
ctcgaactgaatgatcatcacaacgcaactctggagcagggaaaatatgcttccctgacc
attaaaggcgtcaccacggaggattcgggaaaatatggcattaatgtcaggaacaaatat
ggcggcgagacaattgacatcactgtaagtgtgtataaacacggtgaggagataccagtg
gtgaaaagaggagttcaacccccagagcacgcaaaggccgcccatgcagaaccttctaaa
ccagaagcacctaagagttcaaagactggtagaagaaagtaa
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