Rhincodon typus (whale shark): 109927298
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Entry
109927298 CDS
T06055
Symbol
fgd6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109927298 (fgd6)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
109927298 (fgd6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FYVE
PH
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_8
Motif
Other DBs
NCBI-GeneID:
109927298
NCBI-ProteinID:
XP_048466156
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All DBs
Position
22:3116723..3213223
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AA seq
1258 aa
AA seq
DB search
MSAGIKKPPVAPKPRIALGKKPPPPPVAPKPDIIISEPFSTHKGPKPALAPKPVLPKITP
VAEVKPTPLQINKCPDEIKRELSENVKCPTCQGDGMQKGDCELTHHCEISNYSCKTEYEH
KYINGENTGKTQLVIDHLSKLEALEKSKKYDQANYSSTVWQRPETQNSKTVNKYQISSKT
SFPEQKFKDVLTQVVSPNNYLPKQKDAHCDAGIKLHRSNNGQSEVFNTDQTFQNLRNSKR
NTREPFVDGNKDYEIKNAAQESEKGVKNGKNCHSSGTDLKESVHNSQPKVPFTVAEKEKL
TFQDNSSITASTFTSVPCTKPIPMPKPNKARLVGLIRQNCIDNSVEDAMCPNEICNDLCF
KTADGTAVDLKKSVVSLDAGSVSMCKSESSYQTVKMNSASSQDKIAELSQAKDSCNQSIL
PFKKPVLDSVSKVKISSDLQNRSKVEQIKKDLESGNRTLPTDSKSSFIRSSSLSMSLPKY
LSLSYAPKVPASNNDTGSDFDRVLSNDAKSTKSDISPKIIPEKPQRHSLPSSVIVKRDLT
AGNDKSASGSVENDAEEGTGSLSGRETKTSTSEHKTIHLSEKPVWKLPHPILPFLGSPGT
VTLTSTSTNNEANISKPRAKSLSSADSEKLEKSLKAPSKKNSFKRILGIKLSAKMKTDFQ
KFLTKGSYSLDSAPDGLLSMESKDNNLCISGSVTGDQEIKPVKAHSVDSCYHTKKGQILK
SPSDFPNNFPAEQESHVQLHKEGPKNSKLHLTEQQSLTPKYENISGNFDWKSSSSVEDCD
SSFYEIQPYAVSTCYQKYTATQKNQHISPVQNQDNHSLEMDINSDEEVIFSSDEEDASSD
TSKGELDQQDEKQNGEGMKTKVYHIAREIMSSEKVFVDVLKLLHIDFRDSVIQSSRQYGK
QVIEDKILNQILYYLPQLYELNRGLLRELEERMAHWEEHQRIADIFMEKGPYLKMYSTYI
KEFDKNVCLLDEQCKKNPTFANVVREFEMSTRCANLALKHYLLKPVQRIPQYKLLLTDYM
KNLSIDCADYKDTQAALAIVVEVANHANDIMKQGDNFQKLMQIQYSLNSQQEIVQPGRVF
LKEGTLMKLSRKVMQPRMFFLLNDVLLYTTPVQSGTFKMNNMLSLAGMKVSKPSQEAYQN
ELNIESVERSFILSASSAAERDEWLEAISKAIEDYTKKRTTFTGSKSLEEEPDKPELNTP
LGTKAPIWIPDPRATMCMICTCDFTLTWRRHHCRACGKVPAVAIPEAILIIFKFFSER
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggaattaagaagcctccagtggctcctaaaccccgaattgctttgggaaag
aagccacctcctcctccagttgcaccaaagccagatatcatcatatcagaaccattctca
acacataagggaccaaaaccagcattagcaccaaaaccagtattgccaaaaattacacct
gtggctgaagtcaaaccaacaccactgcaaattaataaatgcccagatgaaattaagcga
gaactgagtgaaaatgtgaagtgtccaacttgccaaggtgatggaatgcaaaagggagac
tgtgaattgactcatcattgcgaaatatcaaattactcatgtaaaactgagtatgagcat
aaatatataaatggtgaaaatacaggtaaaacacaacttgtcattgaccacttgtccaaa
ttggaagctttagaaaagagcaaaaagtacgatcaagcaaattattcctctacagtatgg
caaaggccagagactcagaatagcaaaacggttaacaagtaccagataagtagtaaaact
agtttcccagagcagaaatttaaagatgtgctaactcaggttgtatcaccaaacaattat
cttccaaagcaaaaagatgcacattgtgatgcaggtatcaaattacacagaagtaataat
gggcaaagtgaagtgtttaatactgaccaaactttccaaaatctaagaaattccaaaaga
aatacaagagagccatttgttgatgggaataaagactatgagattaaaaatgctgctcag
gaatcggaaaaaggagtgaaaaatgggaaaaattgccactcttctggtactgacctcaaa
gaaagtgtgcataacagccagccaaaagttccatttacagttgcagaaaaggagaagttg
acctttcaggataattcttcaattactgcttcaacattcacttcagtgccttgcaccaaa
ccaattcctatgccaaagccaaataaagcacgcctagttggtctcatcaggcagaactgt
atagacaactctgtggaagatgctatgtgtcctaatgagatatgcaatgatctttgtttc
aagactgcagatggaactgctgtagatttgaagaaatcagttgtttctttggatgctgga
agtgtctctatgtgtaaaagtgaaagttcttatcagactgtcaagatgaacagtgcatcc
tcacaggataagattgctgaactgagtcaagcaaaagattcttgtaatcaaagtatttta
cccttcaaaaagccagttctggactctgtctctaaagtcaaaatctcttcagacttgcaa
aatagaagtaaagtagaacaaataaagaaagatttggaaagtggcaacagaacattgccg
acagacagcaaaagcagttttattagaagtagttctctctctatgagtttgcccaaatac
ctcagtttatcatatgctccaaaagtgcctgcatcaaataatgatactggttcagatttt
gatagagtacttagtaatgatgcaaagtccactaagtcagacatctccccaaagattatt
ccagaaaaaccacagcgtcacagcctgccttcatctgttatagttaaaagggatctgaca
gcaggcaatgataagagtgcaagtggttcagtagaaaatgatgcggaagagggaactggc
agtttatccggcagagaaaccaaaacatctactagtgaacacaaaacaattcatctgagt
gagaaacctgtatggaaacttccacatcctattttgccttttctggggagtcctggcact
gtgacactaacaagtacttcaacaaataacgaagccaatatatcaaagccaagagctaag
tctttgtcatctgctgattctgaaaagctggagaagtcactaaaagcaccttcaaagaaa
aactcatttaagcgaattcttggtataaaactctctgctaaaatgaaaacggactttcaa
aaatttttgacaaaaggcagctattcactagacagtgcaccagatggacttctttctatg
gaaagtaaagacaataatctctgcatttcagggtcagtgacaggtgatcaagaaattaaa
cctgtgaaagcacattctgtggattcctgctaccacacaaagaaagggcaaatacttaaa
agcccctctgattttccaaataactttcctgctgaacaggaatctcatgttcaactccac
aaagaagggccaaagaattctaaactgcatttgactgaacaacagtctcttactcctaaa
tatgaaaacatcagtggtaattttgattggaaaagttcttccagtgttgaagactgcgac
agtagtttttatgaaatacaaccctatgcagtatcaacctgctatcaaaaatacactgca
actcagaagaaccagcatatcagccctgtacagaatcaggataaccattctttagaaatg
gacatcaactcagatgaagaagtcatttttagctccgatgaagaagatgccagttcagat
acaagtaaaggagaactggatcagcaagatgagaagcagaatggcgaaggaatgaaaacc
aaagtgtatcatattgccagagaaatcatgagctccgagaaagtatttgtggatgttttg
aagcttttgcacattgatttcagggattcagtgatccaatcttcaagacagtatggaaag
caagtgattgaagataagatcttgaaccagatcctatactacctgccacagctgtatgaa
ctaaatcggggtctgctacgagaattggaggaaagaatggctcattgggaagagcatcag
agaatagctgatatcttcatggagaagggaccgtacctcaagatgtactcaacatatatc
aaagaatttgacaagaatgtttgtttgttggatgaacaatgcaagaagaaccctactttt
gcaaatgtggttagagaatttgagatgagtactcgctgtgcaaatctggcactcaaacat
tacctgttaaaacctgtccagaggattccacaatacaagctgcttctaacagattatatg
aagaacctgtctatagactgtgccgattacaaagatacccaagctgctcttgccattgtt
gttgaagtagcgaaccatgccaatgacataatgaaacaaggggataacttccagaagctg
atgcagattcagtatagcctaaatagccaacaagaaattgtacaacctggaagggtgttt
ttgaaggaaggaactttgatgaagctttctagaaaggttatgcagccccgaatgtttttt
ttgctgaatgacgtgttactctacactacgccagtgcaatctggaacattcaagatgaac
aacatgctttctctagcaggtatgaaggtcagtaagccatctcaagaagcctatcaaaat
gaactgaacatagagagtgttgaacgatctttcattctttcagcaagttcagcagcagaa
agagacgaatggttagaagccatttccaaagccattgaggactacacaaaaaaaaggaca
acattcactggaagcaaaagccttgaggaagaaccagacaaaccagaattaaatacacct
ttgggcactaaggcacccatatggatccctgatcctcgggctaccatgtgcatgatctgc
acatgtgactttacacttacctggaggcggcatcactgtagagcatgtggaaaggttcca
gcagtggccattccagaagccattctaataatcttcaagttcttttctgaaagatag
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