Rhincodon typus (whale shark): 109927329
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Entry
109927329 CDS
T06055
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109927329 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rtp03051
]
109927329 (psmc5)
Proteasome [BR:
rtp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
109927329 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
Prot_ATP_ID_OB_C
RuvB_N
nSTAND3
TIP49
PRS7_OB
Mg_chelatase
AAA_18
AAA_28
NPHP3_N
AAA_3
AAA_33
Parvo_NS1
AAA_14
ATPase
AAA_24
IstB_IS21
AAA_7
DUF815
AAA_17
PhoH
Sigma54_activat
AAA_25
bpMoxR
RNA_helicase
DUF5906
ABC_tran
AAA_19
Zeta_toxin
TsaE
AAA_11
NACHT
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
109927329
NCBI-ProteinID:
XP_048448679
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
VHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTY
EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD
CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE
VQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDI
LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVA
KVMQKDSEKNMSIKKLWK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gttcatccagagggaaaatttgttgtggatgttgacaagaacattgacattaatgatgtg
actcctaactgccgtgtagctttgagaaatgatagctacactctacacaaaatcttgccc
aacaaagtggaccctctggtatctctaatgatggttgagaaggttccagattctacctat
gaaatgattggtggcttggacaaacagatcaaagagattaaggaggttattgaactgccc
gtgaagcatcctgagctgtttgaagctcttggcattgcgcaaccaaagggtgtgctgctg
tatggacctccaggcactgggaaaacactgttagcaagagctgtggcccatcacactgac
tgcactttcatccgcgtatctggctctgaacttgtacagaaattcattggcgagggtgct
cgtatggtgcgtgagctgtttgtaatggctagagagcatgctccgtctattattttcatg
gatgaaattgattctattggttcctcacgattggagggaggctcgggtggtgacagtgaa
gtgcagcgcacgatgttggaacttctaaatcagctagatggatttgaggccactaagaat
atcaaggtaattatggcaactaacagaattgacattcttgatcctgctttgctgcggcca
ggacgaattgatcggaaaattgaattccctcctccaaacgaagaggctcgtcttgacatt
ctgaagattcattctcgcaaaatgaacttaacacgtggtatcaatctgcgcaagattgct
gagttgatgccaggggcatcaggtgcagaggttaagggtgtatgcacagaagctggcatg
tatgccttaagagaaagaagagttcatgtcacacaagaagactttgaaatggcagtggca
aaggttatgcaaaaggacagtgaaaagaacatgtctatcaagaagctttggaaataa
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integrated database retrieval system
