Rhincodon typus (whale shark): 109927356
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Entry
109927356 CDS
T06055
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109927356
03037 Cilium and associated proteins [BR:
rtp03037
]
109927356
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109927356
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109927356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
109927356
NCBI-ProteinID:
XP_020382943
LinkDB
All DBs
Position
3:63346258..63400241
Genome browser
AA seq
946 aa
AA seq
DB search
MTLPQNSVSIEVDNDESDDEQSEETDNDSSEVEPQNTKESVGRSGNRKRKIEQESEEKSD
DSEEEEGEEEQSRKKNLKNRNKLTNRNNSDESEKETPKSRKNRRNVKSKKKDSHNDDHDD
ESLDKKKKGKGDKKEMDSESDKEDNKKRGKRKDKNCKKDGNKGKGNKKKYSSSSEEESEE
VITEEDMAKLKDEVDEKKKLIATLRNKPSPMKHKLQLLKEAQEFVEKFEGALGKGKGKRF
YAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMVL
FGLTFGLVMIPEALMGKPYGSMPRKTVPISEQDSAMNFATLWDFGGYAQYSVLFYGYYNN
QRTIGWLKFRLPLGYFLVGVGTIGYSFTVVIRTMASNANEEGGGDDTSFNFSWKMFTSWD
YLIGNAETADNKFASITTSFKESILEEQENRKEGNIHLTRFLRVLANFLVLLTLAGSGYL
IFFVVRRSQKFAQEGLDDYGWWERNEVNMVMSLLGMFCPMLFDIISPLENYHPRIALQWQ
LGRIFALFLGNLYTFIIALLDEINLKLEEEKIVKYNITIWEKNLYNGSWLENSTSRPALD
IDPAIVPRGPCWETMVGQEFVRLTVSDTLTTVITILIGDFLRAVFVRFVNYCWCWDLEYG
FPSYAEFDISGNVLGLIFNQGMIWMGAFYAPCLPAINVLRLLASMYLQCWAVMCTNVPHE
RVFKASRSNNFYMAMLLIILFLSTLPAVYTIVSIPPSFDCGPFSGKDRMFDVIQETLDND
FPAWFGKVFTAATNPGLILSFILLLALAIYYLQATSESYKAANLELKKKLQNQSDENKKR
NKKNAKAAANQMEELQNSLQKANERATSGDADKKANGVNSSNQPSAQWAYPPNGRGMRLA
VPPHVAVTRPPRPRGPGQLPGQPRYPGPQQYHGAHPRMPRAGAAYR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcctcagaatagtgtgagcattgaagtggataatgatgaaagtgatgatgag
cagagtgaagaaacagataatgacagctcagaggtggagccacaaaacaccaaggaatca
gtaggaaggagtggaaatagaaagagaaagattgaacaagaatcagaggagaaatctgat
gactcggaggaggaggagggggaagaagagcaaagtagaaagaaaaatttgaaaaataga
aacaaattaactaacagaaacaactcagatgaatccgaaaaagaaacacctaaaagtagg
aagaacaggagaaatgtaaaatctaagaagaaagattctcacaacgatgatcatgatgat
gagtcactggacaagaaaaagaaaggaaaaggtgacaaaaaggaaatggacagtgagagt
gacaaggaggataacaagaaaaggggcaagagaaaggataagaattgtaaaaaagatgga
aataaaggcaaaggaaataaaaagaaatatagttcaagttcagaagaagaatctgaagaa
gttattactgaagaagatatggccaagctgaaagatgaagttgatgaaaaaaagaaacta
attgcaactttacgtaacaaaccctcacccatgaaacataaattacaattactgaaagaa
gcacaggaatttgtggagaaatttgaaggcgcacttgggaaaggaaaaggcaaaaggttt
tatgcctataaagtaatgatgaccaaaaaatggatgaaatttcagcgtgattttgagaat
ttcaaaactgcttgtattccatgggaaatgaaaataaaagagattgaaagtcactttggt
tcatcagttgcttcatatttcatcttcttgagatggatgtatggaatcaatatggttctg
tttggcttaacctttggtttggtcatgatccctgaggctctgatgggaaagccatatggc
agcatgccaagaaaaactgttccaatcagtgagcaagactcagccatgaattttgctaca
ttgtgggattttgggggctatgcgcaatattctgtccttttctatggttactataataat
cagcgtacaattgggtggctgaaattcaggttacctttgggctacttcctggtgggagtc
ggtacaatcggatacagcttcacggtggtgattagaacaatggcaagcaatgcgaatgag
gaaggtggtggagatgacacaagttttaatttcagttggaagatgttcacaagctgggac
tatttgattggcaatgcagaaactgcagacaataagtttgcttccatcactaccagtttt
aaggaatctatacttgaagaacaggagaatcggaaggaaggaaatatccatttaacccga
tttttacgtgttctcgccaacttcttggtactcctcactcttgctggaagtggctatctt
attttcttcgttgtcagaagatctcagaaatttgcacaggagggactggatgactatgga
tggtgggaaagaaatgaagtaaatatggtcatgtcactgctgggcatgttctgtcctatg
ttattcgacatcattagtcctttagagaactaccatccacggattgcactccagtggcaa
ttgggccgcatttttgcattatttcttggtaatctctacacatttattatcgcattattg
gatgaaattaaccttaagcttgaagaagaaaagattgttaaatacaatattactatctgg
gagaagaatctttataatggaagttggttggagaactcaacttcacgtcctgcattagat
atagatcctgcaattgtacccagagggccttgctgggagaccatggtggggcaggagttt
gtacggctcactgtttctgatacattgactacagtcataaccatactgattggagatttc
cttcgtgctgtttttgtcagatttgttaattactgctggtgttgggaccttgaatatggg
tttccatcctatgcagaatttgatatcagtgggaatgttctgggtctgatcttcaatcaa
ggaatgatatggatgggtgccttttatgctccatgccttccagctatcaatgttctacgc
ctcttggcttccatgtatctacagtgctgggcagtcatgtgcaccaatgttccacatgag
cgtgtgttcaaggcttcaagatcaaataacttctacatggccatgctgctgatcatcttg
ttcctgtcaacattgcctgcagtttataccattgtctcaataccaccatcctttgattgt
gggccatttagtgggaaagatagaatgtttgatgttatccaagaaacactggacaatgac
tttccagcatggtttgggaaagtttttactgctgcaacaaatcccggtttgattctgtct
ttcattttacttctggctttggctatctattatctacaggcaacctctgaatcatataag
gctgcaaacttggaattgaagaagaaactacaaaatcaaagtgatgaaaataaaaagaga
aacaaaaagaatgccaaagctgcagcgaatcagatggaagaactgcagaattccttgcag
aaagccaatgaaagagcaacaagcggtgatgcagacaaaaaagcaaatggagttaattct
tcaaaccagccttctgctcagtgggcctatccacccaatggaagaggaatgagacttgct
gttccaccacatgtagctgtgactcgaccaccaaggccaagaggacctggccagttgcca
ggacaacctcgttatcctggaccacaacagtaccatggagctcacccaaggatgcccagg
gctggtgctgcttatagataa
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