KEGG   Rhincodon typus (whale shark): 109927429
Entry
109927429         CDS       T06055                                 
Name
(RefSeq) calreticulin-like
  KO
K08057  calreticulin
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04141  Protein processing in endoplasmic reticulum
rtp04145  Phagocytosis
rtp04148  Efferocytosis
rtp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109927429
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109927429
   04148 Efferocytosis
    109927429
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109927429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rtp03110]
    109927429
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rtp04091]
    109927429
Chaperones and folding catalysts [BR:rtp03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   109927429
Lectins [BR:rtp04091]
 L-type lectins
  109927429
SSDB
Motif
Pfam: Calreticulin DDHD
Other DBs
NCBI-GeneID: 109927429
NCBI-ProteinID: XP_048470053
LinkDB
Position
29:2546316..2586792
AA seq 426 aa
MLLPFLLLCSVAGLVQSTVYFTEQFADGDAWKSRWIESKYKSDYGKFKLTAGKFYGDLEK
DKGIQTSQDARFYALSARFEPFSNEGKNLVIQFTVKHEQKIDCGGGYIKLFPADVDQDAI
HGESEYYLMFGPDICGYSTKKVHVIVSYKGKNHLIKKDIKCKDDELTHLYTLIIKPDQTY
EVKIDNAKVESGNLEDDWDLLPAKKIKDPEVSKPEDWDDRETIDDVDDKKPEDWDKPENI
PDPDAKKPEDWDEEMDGEWEPPMIPNPDYKGEWKPKQIKNPNYKGAWVHPEIDNPEYAPD
TNMYRFENIGVIGLDLWQVKSGTIFDNFLITNDERYAEEFGKETWGKTKEPEKKMKESQD
EEESKRMAEEAKKKDDEADEDGDEEDEEEEDEEEEEEKKEEEEEEEEEEEEEADAPKDKT
KEKDEL
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgctgctgccgttcctactgttgtgctccgtggctggccttgtccagtccactgtctac
ttcaccgaacaattcgcagatggagatgcctggaagagtcgatggattgaatccaaatat
aaatcagactatggcaaattcaaactaacagctggaaaattttatggggatctggagaaa
gacaaaggtatccagaccagccaggatgctaggttttatgccctgtcagcaagatttgag
ccattcagcaatgaggggaaaaacctagtaattcagttcactgtgaaacatgagcagaag
atagattgtggcggtggttatattaaactcttcccagctgacgtggatcaggatgccatt
catggagaatctgaatattatctcatgtttggtcccgatatctgtggatattcaacaaag
aaagtgcatgtaattgtcagctacaaaggcaagaaccatctcatcaagaaagatattaag
tgcaaggatgatgagttgacccacctctacacactgatcattaaacctgatcagacatac
gaagttaagattgacaacgcaaaagtggagtctggaaatctggaggatgattgggacttg
ctaccagcaaagaagatcaaggaccctgaggtgtccaagccagaggactgggatgaccga
gagacaattgatgatgttgatgataaaaagccagaggattgggataaacctgaaaacatt
ccagaccctgacgctaagaaaccagaggattgggatgaagaaatggatggggagtgggag
cctccgatgatcccaaatccagattacaagggtgaatggaaacccaaacaaataaaaaac
cccaattacaaaggtgcctgggttcatccagagatcgataatcctgaatatgctcctgac
acaaatatgtacagatttgagaacattggtgtgattggactggatctgtggcaggtgaaa
tctggtactatttttgataatttcctcattactaatgatgaaagatatgcagaagagttc
ggcaaggagacctggggaaagaccaaggagcccgagaagaagatgaaggaaagtcaggat
gaggaagaaagcaaacgtatggctgaggaagcgaaaaagaaagacgatgaggctgatgaa
gatggggatgaagaagatgaggaggaagaggatgaggaggaagaagaggaaaagaaagag
gaagaggaagaggaagaggaggaggaggaggaggaggcggatgcaccaaaagataaaact
aaagaaaaagatgaattgtga

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