Rhincodon typus (whale shark): 109927450
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Entry
109927450 CDS
T06055
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1
KO
K15215
TATA box-binding protein-associated factor RNA polymerase I subunit D
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109927450
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109927450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1D
Motif
Other DBs
NCBI-GeneID:
109927450
NCBI-ProteinID:
XP_020383062
LinkDB
All DBs
Position
26:complement(25638262..25657262)
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AA seq
385 aa
AA seq
DB search
MHRASGEGDLHSNAEENWREKMEGETNMTGTKDDSENSVLLFSDEDDGIEQLLQDISKKT
MKVVAEQVDSPISTHSSEGDHIPDTIQDKCQQKVLNYQPVCTNPFPPPGDIGRNMVELSE
RESTDSESSLFKTQHPVVPLGQARRRGTGKCPSRSARDQTAENTDSSTDSDDIPYRPNYV
MVGQVRKWRRHKKYKNKSVYKRTGRPVGRPRSSITKAEKKRRLKERGLQFPFVQKEYGRK
HLPFKMIFAYEQAALCGLFTYMKELKCQKHLIKSLEKINVDCPDRECGPIRQCKYLDEKR
PVSPIQESSDETCIEDFDNENTFGVKVVDNSCFVMEKFGKKKKSLRKKNSKGKNKDKCTP
NGKSKAIEKNKSITGQQNNTESSST
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgagcttctggtgaaggggatttgcacagcaatgctgaagaaaattggagagaa
aaaatggaaggtgaaacaaatatgacaggcacaaaagatgacagtgaaaatagtgttttg
ctattttcagatgaagatgacgggattgagcagttgctacaagatattagcaagaagaca
atgaaagtagttgctgagcaagtggactcgcccatctcgacacacagctcagaaggagat
catattcctgatactattcaagacaaatgtcagcagaaagtgttgaattatcaacctgtg
tgcactaatccatttcctcctcctggcgatattggaagaaatatggtagagttatcagag
cgggaaagcacagattcggagagcagtttatttaaaacacagcatcccgttgtaccacta
ggacaggcgagaaggcggggcaccggaaaatgtccatccagatcagccagagatcaaact
gcagaaaataccgacagctcgactgactcagatgacattccataccgtccaaattatgtg
atggttggtcaagtaaggaaatggcgacgacacaagaaatacaaaaacaaatctgtttat
aagaggactgggcgtccagtaggaaggcctcgatcatccataaccaaggctgagaagaag
aggagattgaaggaacgagggctgcagtttccatttgtgcagaaggaatacggaaggaag
catttaccgtttaagatgatttttgcctatgagcaagcagctctgtgtggattatttact
tacatgaaggagctaaaatgtcaaaagcacctcataaagtccttagaaaaaataaatgta
gactgtccagacagagagtgtggtccaataaggcaatgcaagtacctggatgagaaaaga
ccagtttcaccgatacaagaaagcagtgatgaaacctgcattgaagactttgataatgaa
aacacgttcggtgtaaaagttgtggataacagctgttttgtaatggaaaagtttggaaaa
aagaaaaagagccttaggaaaaaaaactccaaaggcaaaaataaagacaaatgtacacct
aatggcaaaagtaaagccattgagaaaaataaatcgataacaggccaacaaaataacaca
gagtcttcctctacctga
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