Rhincodon typus (whale shark): 109927540
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Entry
109927540 CDS
T06055
Symbol
smyd2a
Name
(RefSeq) N-lysine methyltransferase SMYD2 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109927540 (smyd2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109927540 (smyd2a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
109927540 (smyd2a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
109927540 (smyd2a)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109927540 (smyd2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
TPR_NPHP3
TPR_10
TPR_8
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
109927540
NCBI-ProteinID:
XP_048456793
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Position
9:52728798..52763368
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AA seq
384 aa
AA seq
DB search
MCHLFSSRKEGLAKCGRCKLAFYCDVTCQKADWPMHKLECSSMSKFGQNWNPSETVRLVA
RILVKQKMHPEKTPSEELLAVSEFESHLDKLDNEKRELIESDIAALHHFYGKHLDFPDQA
ALIELFAKVNCNGFTIEDEELSHLGSAIFPSVALMNHSCCPNVIVTYKGTTAEVRAVKEI
RAGEEIFTSYIDLLYPTEDRQDRLRDSYFFTCDCTECATKAKDKEKLEITKYGEPPKPEV
IKDMIKYARNIIEEFRRAKHYKTPSELLEICELSLDKMGSTFEDNNVYMLHMMYQAMGVC
LYMQDWEGALRYGQKLIKPYSSKHYPAYSLNVASMWLKLGRLYMGLEHHSAGAKALRKAL
TIMEVAHGKDHPYVLEIQKELEGK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatcttttctcttccagaaaagagggtttggcaaagtgcggtcgttgtaaactg
gcattctattgtgatgtaacctgccagaaagccgactggccaatgcacaaactggaatgc
tcttctatgagcaaatttggacagaactggaacccctctgagacggtcaggctggtggca
agaattctggtcaaacagaaaatgcacccagagaaaactccttcagaggagttactagct
gttagtgaatttgagtcacaccttgataaattggataatgagaaaagagagctaattgag
agcgacattgctgcccttcatcatttctacggcaagcatcttgactttcctgaccaggct
gccttgattgaactctttgctaaggttaactgtaatggtttcacaattgaggatgaagag
ctttctcacttgggttctgctatctttccaagtgtcgccttgatgaatcatagctgctgt
ccaaatgtgattgtaacctacaagggtacaacagcagaagtccgagcggtgaaggagatc
cgtgctggggaagagattttcactagttatattgatcttctatatccaactgaagatcga
caggatcgattgcgggattcctatttcttcacttgtgactgcacagaatgtgcaacaaaa
gcaaaggataaagaaaagttggagattacaaagtatggtgagccgccaaagccagaggtc
atcaaggacatgattaaatatgctcggaatataattgaggaattcaggagagcaaagcat
tacaaaacccctagtgaactgctggagatctgtgagttaagtctggataagatgggctcc
acctttgaggataacaatgtctacatgctgcatatgatgtaccaggccatgggagtctgc
ctgtatatgcaagactgggagggagccttacgctatggtcaaaaactaatcaaaccttac
agcagcaaacactatccagcatattctctgaatgttgcttcaatgtggctgaaactagga
cggttatatatgggcctggaacaccattctgctggcgctaaggcactgaggaaggcattg
accattatggaagtggcacatggcaaagatcatccatatgttcttgaaattcagaaagag
ctggagggaaaatga
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