Rhincodon typus (whale shark): 109927541
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Entry
109927541 CDS
T06055
Name
(RefSeq) centromere protein F
KO
K11499
centromere protein F
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109927541
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
109927541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_leu_zip
CENP-F_C_Rb_bdg
Motif
Other DBs
NCBI-GeneID:
109927541
NCBI-ProteinID:
XP_020383169
LinkDB
All DBs
Position
9:complement(53222293..53258270)
Genome browser
AA seq
2669 aa
AA seq
DB search
MCINMENLEQQISHLKQQLDSACKGMKEKEESMEQLNIKGQKMTNEIEELEKSIQLKEQA
FQELKEESNSLAQWKMENMHVLNTFQCEKEVMNNKIKELEQNLEVSLKKNQEQEQSLEVY
QHTNEKQSEKLRSVEDEKENLHRQTDNLKQILDNKTSELETQKQTFEEFMSSSKQQEQKN
GKEIENLNLSISQLTAQIAELEKKLQQETNKVVKLEESQRILIADYENVSNLVKSKECLI
ECKETEILNLKDNILQITNNLEEQLAKVEAEKKHIMQEYEKVLLDSLEIENTKSTLEIYQ
HDISILKEQITSQESLLKLERQQRSEIENKCEALLKQTEEFEEKIEKREKKYVDLQIEME
QEIHQLKLQHDEALQAILDEKNKSIENIARELETNANNLKCLQVANEELEAKLEACLLSE
KCIQEKDELISLKEEELLQLSKRNEELKNSNNTLMQENIELNKVNSSFADEMKRNETMLQ
EQTKKYEEEAATKENSLKDLKTLCEELSVSQRFLQNTVADKESDIKKLLEKMNEKETRED
GLMHQYAALEEELKPLREKCSALEENKDFLQMQLHESSQELLVRNTEAEELQRKHTECST
EYNAKILDYEERIKTMLEEIDGFKLQLQKMEEIDRLKKELSESYARQDKILEDHNELLQE
KEQLTLLLTKKTEQETIFATELEKLESDLMRVQSENINHSKLITEKNTIAEQLKDTIITK
EIELQKIQARLQLLQMDLEDKEASLESYISQVEQMQSEISSVESRFQNSEEKRILLEKEL
TSMQTEMENVHLKFNESKNQESALLEQITLQRQTIEELQSKFDEQKMDFDHLHSLEIQLA
ESQELEKQCSLKEEEIKELQKKLCQSELRVNELMSQNSDIASKMASQEQELKAQMQITLS
SMEVALQQSEEQRALVQKDLSKVQSELSAMNLHVIESKSHNKTLMEEITLQRKTGEDLKS
ELEKCKEQETHLTSIVSELHSLIAALETEKALPLTKVDLTNNIAIHDTQECKVVKEVMIA
SLEARHQNISEEKEMADVENDSSDDKKNLLNTIENSPNLIVNDQTTFSVENDHLIMKPVE
LETWPVTSEQSITLLREKFQKQQDAADQETWDLHQTLIATRQELEFLKQQHSSEIEQWRL
KLTNLTTEMEIKLAAQRQQTELLSTELEGARVQLQSLDLSSQSLLFTSYHHEESTPHKLI
DSKKHQTEVMIITDQLGSVSRQNVSPDSNVQWEKQPSLQSGTTGESPVFSKDYTIYFDNT
KNVSKDVDNELNESNTKEQCIVQSTQLGNDEVSGPVECQSIHETFVGSLLQLDQESGQIL
HLLPNEENKKITEELLSEMENLRSKLDINQKELFNKTAAYTELEKKMLIFEEKKLQLCNE
LKFSTLENQNLRDKVNDLEEQLKNITLQLNLDKGKLPEVTKVLESPEMNKTDRNEQFLQL
ENELKRAKSDKANLEKHILEMEVDLDELQNRKQLLEKEHESSQRTIFIQAEKLNELETEN
TGVIQEISTLAETNNELEQTSKKLKEKVQDLEAEKIYNVNTIRMLEAEVKKLTSQRQALA
EQMEKNSKEKESIIQEIDCLENNSVLDREGKEKLEQELNLLKKENLSILEQTEALRSKFN
AVELEKLKLLQSLEFSKSEKSEIATRLNSTKAEVAEMRHAIEKLKIRIEADHNKHQQMAE
KLKISERKTDSLQDKVEALERELQVSEENMEQMVLEAETAKEQVEILKEEKEMITENLKR
LKMDLHSLNSEKQILQKQLQQSQEKLETQCSHLARNSEAAENEKVKMTEAYENSVSELQS
HICHLKERMKICQEELEKLRENEKNYLNQNSHLECENIQLSNQLCKTDELNVELKSTNTI
LSKDLQIIQQQLNLHTEEKEKLQQQIIDLEQLKQKNSMALSNLHIEVENLKRERNNLQTA
VVESQQEAQDLTSRLTIVQNMKENSENQLQNELQVAHLQTTTLLDQVRDLTENNRKLQDD
LSVASEKIQKMQQEFDAEKNLISAQLEEFRNQTENIKLQLEICESEKYKLEKEVEYFQNE
LQITDVLKKELDEHKLKLKCIQGEHEAVLKDLQDQHEVQVQSYQKKMVEMELQLTAQDME
INKIKVAKEEINVAFKDAICKVNDQTENYHKLQDDLTIANEKILKMQQDFDVEKNLISAQ
LEEFRRLSESFKLQLEISQSEKNKLQKDVGYFQNELQITDVLKKDLDEHKHRLKCIQEEH
QAVLKGLQDQHNVQVQLDQAKLAGMQKQLTEQEMEISNLKTAKEEVNVTLKEAICKAEEL
QKSMAKLKGDKDCAQNKLLLWMKSCKQLEHEKESLKKHIQQQEELLAQLQKNPKLDSQAD
ELTAEVEDLKEALEEKTKEADENMEKYWNLIKSSHKLEEENEMLKSRVVFLSNKLQQSNA
QEENGVAEQVAAPRSVVHQCEKKSPGQSNSQQKYLKSPGMNYIAEQPMDAPLELAGKKSH
QKRPDAQSNRTAKRVRGAESKEERDKLKSEALQNSAKRTRNDKEHEIILRPATKDETPSE
PEGLPHIVKKGFADIPTVSHSPYILRRTTLLNRASSSLAVQSRISPHRQMQDKGVVQTCN
KSETTAGSSPVQQHSAEFPALHPDSVPTMTEPPLSSLTNSANKMGFNTSDGKQSEKSRCP
LNTKKFVEQKKRYTKQITVTDENENCKVQ
NT seq
8010 nt
NT seq
+upstream
nt +downstream
nt
atgtgtataaatatggaaaaccttgaacaacaaatttctcatctgaagcagcaacttgac
tctgcttgtaagggtatgaaagagaaagaagaaagcatggaacagctaaatatcaaaggt
caaaaaatgacaaatgaaattgaagaactggaaaaaagtatacaattaaaagaacaggca
tttcaagaactgaaagaggaaagtaattccctggctcagtggaagatggaaaatatgcat
gttctaaatacttttcaatgtgaaaaggaggtgatgaataataaaattaaagaattagag
caaaatcttgaagtgagtttgaaaaaaaatcaagaacaggaacagagtctagaagtttat
cagcatacaaatgaaaagcaatcagaaaagcttaggtcagttgaggatgaaaaagagaat
ttgcatcgccagactgataatctcaagcaaattctagacaacaaaacttctgagttagaa
acacaaaagcagacctttgaagaattcatgagttcttcaaagcagcaagagcaaaagaat
ggaaaggaaatagaaaacctgaacttgagcatttctcagctcacagcacagatagctgaa
ctggagaaaaaattgcaacaagaaactaacaaagttgtgaaacttgaagagtctcagcgt
atattgattgctgattatgaaaatgtcagtaatctggtgaagtcaaaagagtgcttaatt
gaatgtaaagaaacggaaattttgaatttgaaggacaacattttgcagatcacaaataat
cttgaagaacagcttgctaaagttgaagcagagaaaaaacatataatgcaggagtatgaa
aaagttttacttgacagtcttgaaattgaaaatacaaagtcaacgttagaaatttaccaa
catgatatctccatcctcaaggagcagattacttctcaagaatccttactgaagcttgaa
agacaacaacgatctgagattgagaacaagtgtgaagctctattaaaacagacagaagaa
tttgaagaaaaaattgagaagagagaaaagaaatatgttgacttgcaaatagaaatggaa
caagaaattcatcaactgaaactgcaacacgacgaagcattgcaagctatcttagatgag
aaaaataaatctattgaaaacattgcacgagaacttgagaccaatgcaaataatttgaaa
tgtttgcaggtagccaatgaagagttagaagcaaagttggaagcttgtcttttgtctgag
aagtgcattcaggaaaaagatgagttaattagtttgaaggaagaagaactcctacagctt
tctaagagaaatgaagaactgaaaaactccaacaatactttgatgcaggaaaatatagag
ttgaacaaggtgaattctagttttgctgatgaaatgaaaagaaatgaaacaatgttgcag
gaacagactaaaaaatatgaagaagaagctgctaccaaagagaactcactcaaagatctt
aaaactctgtgtgaagaactaagtgtaagtcaaagatttctgcagaacacagtagcagac
aaagaaagtgacattaagaaattgctggaaaagatgaatgagaaggaaaccagggaagat
gggttaatgcatcagtatgctgcattagaagaagaattgaaacctcttcgtgaaaaatgc
agtgctttggaagaaaacaaagattttttgcaaatgcagttgcatgagagctcacaggaa
ttattggtgagaaatacagaagctgaggagctgcaaagaaaacatactgagtgttctaca
gaatataatgccaaaattctagactatgaggaaaggattaaaacgatgcttgaggaaata
gatggtttcaagttacagctgcagaagatggaagaaattgatcgtttaaaaaaggaactt
tctgaatcatatgcaagacaagacaaaatactggaagatcacaatgaattgctccaggaa
aaagaacaattaacactcctgttaacaaagaaaactgaacaagaaaccatttttgcaaca
gaattagaaaagcttgaaagtgatttgatgagagtccagtctgaaaatattaaccacagt
aaattaattacagagaaaaatactattgcagaacaattgaaagacacaatcataacaaaa
gaaattgaacttcagaaaattcaagctcgacttcagcttctccagatggaccttgaagat
aaagaggcttctttagagtcttatatttcccaagtagaacaaatgcaaagtgagattagc
agtgtggagagtaggtttcaaaatagtgaggagaagaggattcttctggagaaggaatta
acttcaatgcagacagagatggaaaatgtgcatttgaaatttaatgaaagtaagaaccaa
gaatcagctttgctggaacaaataacactacaaagacaaacaattgaagagctgcagagt
aaatttgatgaacaaaaaatggattttgatcatctccattccttggaaatccagcttgct
gaaagccaagaattggagaagcaatgcagcctaaaagaagaggagataaaggaacttcag
aagaaactgtgtcagtctgaacttcgtgtaaatgaattaatgagtcaaaatagtgatatt
gcatctaaaatggcttctcaagagcaggagctaaaagcacaaatgcaaattactttgagc
agtatggaggttgcactgcagcagagtgaggagcaaagagcacttgtgcagaaagacttg
agtaaggtgcagtctgaattatcagctatgaacttgcatgtcatcgaaagtaaaagtcat
aataaaactttgatggaagaaataactctgcaaaggaaaactggtgaggatctgaagagt
gaacttgaaaaatgtaaagaacaggaaacacatctcacctcaatcgtgtctgagttacac
tctcttattgcagctttggaaactgaaaaagcattgccgttgactaaagtagatttaaca
aacaatattgctatccatgatactcaagagtgcaaagttgtaaaagaagtaatgattgca
tccctagaagctaggcatcaaaacatttcagaagagaaagagatggctgatgttgaaaat
gattcatcagatgataagaaaaatcttttgaacacaattgaaaattcacccaacttgatt
gtaaatgaccaaacaaccttttctgttgaaaatgatcacctgataatgaagcccgtggaa
ctggaaacttggcctgtgacttctgagcagtctattacattgctcagagaaaaatttcaa
aaacaacaagatgctgcagatcaagaaacctgggatttgcatcaaaccttaattgcaaca
agacaagaacttgaatttctgaagcaacagcattcatcagaaattgaacaatggcggttg
aagttgaccaatctaacaactgagatggaaataaagttggctgcacagaggcagcaaact
gagttgctgtctacagagttagaaggtgcgagagtccaacttcagtctctggacctcagt
tcccaatcattgctgtttactagctatcatcatgaagagagtactccgcataagcttatt
gattcaaagaaacaccaaacagaggtgatgatcatcactgatcaattgggatctgtcagc
agacaaaatgtgtcccctgattctaatgtacaatgggagaaacaacccagtttacaatct
ggaacaacaggagaaagccctgtattttccaaggactacaccatttactttgataatact
aagaatgtaagcaaggacgttgataatgaattgaatgaaagcaacacaaaagaacagtgc
atagttcaatcaacacagttaggtaatgatgaagttagtggcccagtggaatgccaatca
atccatgaaacctttgttggatctctgttacaattggaccaggagtctggccaaatactt
catctgcttccaaatgaagaaaataagaaaataactgaagagctactcagtgagatggag
aatttgcgtagcaagctagatatcaatcaaaaagaactatttaacaaaactgctgcttac
actgagttagaaaagaaaatgctcatctttgaagaaaagaagctccaactatgtaatgaa
ttgaagttttctactcttgaaaatcaaaatcttcgagacaaagtaaatgatttggaagag
cagctcaaaaatattacattacagctgaatcttgataaaggtaaattgcctgaggtgacc
aaggtgttggaaagcccagagatgaataaaacagacaggaatgaacaattccttcaacta
gaaaatgaactgaagcgagcaaaatcagataaagctaacctggaaaaacacattcttgaa
atggaagttgatctggatgagttgcagaacagaaagcagttgttagaaaaagaacatgaa
tcaagtcaaaggaccattttcattcaggcagaaaagctgaatgagcttgaaacagaaaat
actggagtcattcaggagattagtactctagctgagacaaataatgaattggagcaaact
agtaaaaagttgaaggaaaaagttcaagatcttgaagcagagaaaatctacaatgttaat
acaatccggatgcttgaagctgaagtaaagaaactaaccagtcagcgacaagctcttgct
gaacaaatggagaaaaattcaaaggaaaaggaaagcataatccaggaaattgattgtttg
gaaaataattcagtgttggatagagaaggtaaggagaaattagaacaagaactaaatctg
ttgaagaaggaaaacttatccatcctagagcaaactgaagctctgcggagcaagtttaat
gcagtagagcttgaaaagttgaaactactccagtctttggagttctctaaatcagaaaaa
agtgaaattgcaacaaggttgaactctaccaaggcagaagtagctgaaatgcggcatgct
attgagaaacttaaaatacgcattgaagcagatcataataaacatcaacaaatggctgaa
aaacttaaaatcagtgaacgaaaaacagactcccttcaagacaaggttgaggcacttgaa
cgggagcttcaggtctctgaagaaaatatggagcaaatggtattagaagctgaaactgca
aaggaacaggttgaaatattaaaggaagagaaggaaatgattactgaaaatctgaagcga
ttgaaaatggacctccattccttaaactctgagaaacaaattttacagaagcaactgcaa
caaagtcaggaaaaattagaaactcagtgctcacatttggcaagaaattctgaagcagct
gaaaatgaaaaagtcaaaatgacagaagcctatgaaaattctgttagtgagctacagtct
cacatttgccatttaaaggaaaggatgaaaatctgccaagaagagttggaaaaattgaga
gaaaatgagaaaaattacctcaatcaaaattcacatttggaatgtgaaaatattcagcta
tccaaccaactttgtaaaactgatgagctaaatgtggagctaaaatctacaaatacaata
ctaagtaaagatcttcaaattattcaacagcagttgaatttgcatacagaagagaaagag
aaacttcagcaacagattatagatctggagcaattgaagcagaaaaattctatggctttg
agtaatttgcatattgaggtggagaacttaaagagagaaaggaacaacttacagacagca
gtagtggaatctcagcaagaagcgcaagatttgacatccaggctaacgatagtgcaaaac
atgaaggaaaattctgagaatcaactacaaaatgaactacaggttgcacatttgcaaact
actacacttcttgatcaggttcgtgatcttacagagaataaccgtaagctgcaggatgat
ttatctgtggccagtgaaaagattcagaaaatgcagcaggaatttgatgcagagaagaat
ttgatctcagcacaacttgaagaattcaggaatcagacagaaaacattaagttgcagcta
gaaatctgtgaatcagaaaaatacaagttagaaaaggaggttgaatattttcagaatgaa
ctacagatcactgatgtcctgaaaaaggaactggatgaacataaactaaaactaaaatgc
attcaaggagaacatgaagctgtgcttaaagatttacaggatcagcatgaagttcaagta
cagtcgtaccaaaagaaaatggtcgaaatggaattacagctcactgcacaagacatggaa
atcaacaaaataaaggttgcaaaagaagaaatcaatgttgcctttaaagatgccatctgc
aaggtaaatgatcagacagagaattaccataaactgcaggatgacttaaccatagccaat
gaaaagattctgaaaatgcagcaggactttgatgtggagaagaatttgatttcagcgcaa
cttgaagagttcagacgtctgtcagaaagttttaagttacagctagaaatttctcaatca
gaaaaaaacaagttacaaaaggatgttggatattttcaaaacgaacttcagatcactgat
gtcctcaaaaaggatctagatgaacataaacacagactaaagtgcatccaagaagagcat
caagctgtgcttaaaggtttacaagatcagcataatgttcaagtacagctggaccaagca
aaattggctggaatgcagaaacagctaactgaacaagaaatggaaattagcaacctaaag
actgcaaaagaagaagtaaatgttaccttaaaagaagctatctgcaaggcagaagagctg
caaaaatcaatggctaagctaaaaggggacaaggattgtgctcaaaataaactgctactt
tggatgaaaagctgtaaacagcttgaacatgaaaaggagtcactgaagaaacacattcag
caacaagaggagctacttgcacagctacagaaaaacccaaaactggattcacaagcggat
gaactaactgctgaggtggaggatctaaaggaggcactggaggaaaaaacaaaagaagct
gatgaaaatatggagaaatattggaacctgattaaaagcagccataaattggaggaggaa
aatgaaatgttaaagagcagggtggtcttcttgagcaataaattacaacagtcaaatgct
caagaagagaatggtgttgcagaacaagttgctgcaccaagatcagttgtacaccagtgt
gaaaagaagtcacctggtcagtccaacagtcagcaaaaatatctgaagtctccaggtatg
aactatattgcagaacagcctatggatgctccactggaattagctggaaagaaaagtcac
caaaagcgcccagatgctcaatcaaaccgtactgcaaagagagtaaggggagctgaatcg
aaggaggaacgagataaattgaaatcagaagctttgcagaattctgcaaagaggacaaga
aatgataaagagcatgagattattttaaggcctgctacaaaagatgaaactccatctgaa
ccagagggtcttccacatattgttaaaaaaggttttgcagacatacccactgtatcccat
agcccctacatactgcgtaggacaaccttactaaacagggctagttccagccttgcagtt
cagagcaggatatctccccataggcagatgcaagataagggagttgtgcaaacctgcaac
aagtcagagacaacagcaggaagcagtcctgtccagcagcactcagctgaatttccagca
ttacatccggattcagtaccaactatgacagagccacctctatcatctttaacaaacagt
gcaaataaaatgggctttaatacttctgatgggaagcaatcagaaaaaagtaggtgccca
ttgaatacaaagaaatttgtggaacaaaagaaacgttacaccaaacagattactgtgaca
gacgaaaatgaaaattgcaaagtacagtaa
DBGET
integrated database retrieval system
