Rhincodon typus (whale shark): 109927708 Help Entry 109927708         CDS       T06055                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism rtp  Rhincodon typus (whale shark) Pathway rtp03440   Homologous recombination rtp03450   Non-homologous end-joining rtp04218   Cellular senescence Brite KEGG Orthology (KO) [BR:rtp00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     109927708 (rad50)    03450 Non-homologous end-joining     109927708 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     109927708 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rtp03032]     109927708 (rad50)    03400 DNA repair and recombination proteins [BR:rtp03400]     109927708 (rad50) DNA replication proteins [BR:rtp03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     109927708 (rad50) DNA repair and recombination proteins [BR:rtp03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      109927708 (rad50)     BRCA1-C complex      109927708 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      109927708 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rad50_zn_hook AAA_23 SbcC_Walker_B DUF1664 AAA_21 Intein_splicing Phage_Orf51 Motif Other DBs NCBI-GeneID:  109927708 NCBI-ProteinID:  XP_048459653 LinkDB All DBs Position 12:complement(59664431..59779778) Genome browser AA seq 1243 aa AA seqDB search MKVAHETDVRAQIRLQFRDVNGGVVAVQRSMLCTQKGKKTEFKTLEGVITRMKHGEKVSL SSKCAEVDREMISALGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKAL ETLRQVRLKQSQSVREYQAELKYLKQNKEKAHTIQRQLEDKETQLAASKQNVQVIENQIA PLEERLSQIDQNLSKVMKLDNDIKALESRKKQMEEDNRELEEKIEQLFQGTDEQLRDKYL NHQRTVIEKERLLTDRQRELDRVNQRCQKLNRQKSEMLVEQGRLQLQADRQQDNIKKRDS LVHALARQLQLDGYERAPFSDRQFDSFRCQITARLHSEKESAGQIMREFAEKEAAKQRQI DEIRDTKTGLERTIELKSGIQRKRQDELKNVKLELQQLEGSSTRLQELDQELNKAEHDLD RAERGSNVESLKTELVNLQNEKGALDKSLRKLDQEMELLNSHTMARTQMEMLKKDKADKE EQIRRIKSRHNEELVALLGHFPNKRQLEDWLHAKATEINQSRDKLFKMNKELASADQNKN HTSAALKTKEQQLSTYEEKLFDVCGGQDFESDLYKLQDDIEKTSKQRAMLSGATAVYSQF ISQLTEENEPCCPICQRVFPSEAELQDIIDDLQSKLRLVPDKLKSAESELKKKEKRRDEM MGLKPIRESVVELKERDLPELRNKLQSINRDIQRLKSDVEEQETLLAVFLSEEGSAKVCL QDVLLMERYQMELRDVERKIAQQAAKLQGIDVNRTMQQVNQEKQEMQLQVETVCNKIELK RKMIQDHQEQIQLLKSIVNEVRAEKLQIASNMQRRQQLEEQSAEFSTEVQSLQREIRESK EQLPPLAAALDKLQQEKQDLIERKNMNCKEIQDKINEIKEKVKNIDDYAREIEKYIKERR DEYKEQKESELQDTITQLNEAEKQRDRIHKDMEATRKDIDTQKLEERWLQDNLTLRKRME ELDVVETKRKELLKEMGEMKVMHLRNERKQLEERLDDFKKNRNLAQGRQKGFEEEILHFK KELREPQYRDAEEKFREMMIVMRTTELANKDLDIYYKALDQAIMRFHSMKMEEINKIIRD LWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMVKGDTALDMRGRYSAGQKVLA SLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSNQRNFQLLVITH DEDFVELLSRSQYVESFYRVKKNIDQCSEIVKCSVSSLNTHGP NT seq 3732 nt NT seq  +upstreamnt  +downstreamnt atgaaggttgcccatgagactgatgtgcgagctcaaatccgcttacagtttcgagatgtg aatggaggagtcgtggctgtgcagaggtcaatgctttgcacacaaaaagggaaaaagact gagtttaaaacactggaaggggtgatcacccgaatgaagcacggggagaaggtcagcttg agctcgaaatgtgcagaggtagaccgtgagatgatcagtgcgttaggggtgtcaaaagct gtattaaataatgtcattttctgccatcaagaagattcaaactggcctttgagtgaagga aaagctctgaaacagaaatttgatgagattttctcagcgacaagatacattaaagccctg gaaacattacggcaagtccgtttgaaacagtcacagtcagtacgggagtatcaggcagag ctcaagtacctgaagcagaacaaagagaaagcccatacaattcagcgtcagctggaagat aaagaaacccagctggctgcttcaaagcagaatgtccaagtgattgaaaatcagattgcc cccttggaggagcgattgtcccaaattgaccagaacctgagcaaagtgatgaagcttgac aatgacatcaaagctcttgaaagcaggaaaaagcaaatggaggaggacaaccgtgaactg gaagagaaaatagagcagcttttccaggggactgatgagcagcttcgggacaagtacctc aatcaccagagaacagtgattgaaaaagagagactactgactgatcgtcagcgtgagctt gatcgggtaaaccagagatgccagaaactcaaccgacaaaagtcagagatgctggttgaa cagggacgacttcagctccaggcagatcgccagcaggacaacatcaaaaaacgcgattct ctggtccacgctctcgcgaggcagcttcagttggatggttacgaaagagcaccgttcagc gatcgtcagtttgatagtttccgttgtcaaatcacggctaggttgcacagtgagaaggaa tcggccggccaaatcatgagagaattcgcggagaaagaagcagccaagcagcggcagatt gatgagatcagggatacgaagacaggactggagcgaacaatcgaacttaagtcaggcatt cagagaaagagacaggatgagctgaaaaatgttaagctggaactccagcaactggaaggg tcttccactagactgcaagaattggaccaggaactcaacaaagcggagcatgacctcgac cgtgcagaaagaggcagcaatgtggagagcctgaagactgaactggtgaatctgcagaat gagaaaggcgcactagacaagtccttgcggaaactggaccaggaaatggagttgttaaac tcgcacactatggccagaactcagatggaaatgctgaaaaaagacaaggctgacaaagaa gaacagatcaggaggataaagtcaaggcacaatgaggaattggtcgcactgttggggcat ttcccaaacaagagacaactggaagattggcttcatgcaaaagccacagagataaatcag tctagggataaactattcaagatgaataaggagttagcttcagcagaccagaacaaaaat cacacaagtgctgcactgaaaacaaaagaacagcaactctctacctacgaggagaaactc ttcgacgtatgtggaggccaggattttgagagtgacctgtataaacttcaggatgacatc gaaaagacatcaaagcagagagctatgctttctggagcgacggctgtctacagccagttt attagccagttaacggaggaaaatgagccctgctgtcccatctgccagcgtgttttcccc tcagaggctgagttacaggacatcatcgatgatctgcagtcaaaactgcggcttgtcccg gataaacttaaatcagccgagtcggaactgaagaagaaagaaaaacgtcgcgatgagatg atgggattgaaaccgatcagggaatctgttgttgaacttaaggaaagggatttacctgaa ttgcgcaataaacttcagagcatcaatcgagatattcagcgcctgaagagtgatgtggag gaacaggagactcttcttgctgtcttcctgtctgaggaaggcagcgcaaaagtgtgtctg caagatgtattgcttatggagagataccagatggaattgagagacgttgaacgaaagatt gcccagcaagctgccaagcttcagggaatagatgtgaaccgcacaatgcagcaggtcaac caggagaagcaagagatgcaacttcaagtggagacagtgtgcaataaaatagaactgaag aggaaaatgattcaagatcaccaagagcagatccagcttctgaagagtattgtcaacgag gtccgagctgagaaacttcaaattgccagcaacatgcagcgacgtcagcagctggaagaa cagagtgctgagttttccacagaggttcagtccctacaaagagaaataagagaatctaag gaacagttacctccactagctgcagctctagataaactacagcaagaaaaacaggatctg atagagaggaaaaacatgaactgcaaggagatacaagataagataaatgaaataaaagaa aaagtcaaaaatattgatgattatgcaagagaaattgagaaatacatcaaggaaagaaga gatgaatacaaagagcaaaaagaatctgagcttcaagataccattactcagctaaatgaa gctgaaaagcaacgagacaggatacataaagatatggaggctacgcggaaggacatagat acacagaaacttgaggagcgctggttgcaggataacttaacgttacggaagagaatggaa gaattggatgttgtggagaccaagaggaaggagcttttaaaagagatgggagagatgaaa gtaatgcatctcagaaatgagcggaaacagctggaagagcgactggacgatttcaagaaa aatcgcaacctggctcaagggcggcagaaaggttttgaggaggaaatacttcatttcaaa aaggagctgagagaacctcagtatagagacgcggaggaaaagtttcgagaaatgatgatt gtaatgagaacaactgaactggctaacaaggacctggatatttattacaaggcactagac caagccatcatgcgattccacagtatgaagatggaagaaatcaacaaaattatccgtgac ctatggcgaagcacttacagaggtcaagatattgaatatattgaaatacgttctgatgct gatgaaaatgtgtcagccagtgacaaaaggaggaattataattatcgtgtagtaatggtg aagggagacactgcactggatatgagaggaaggtacagtgctggacagaaggtccttgca tcactcattatccgtctggctctggctgagaccttctgcctgaattgtggaatccttgca ctggatgaaccaaccacaaatttagaccgggagaacatcgaatccttggctcacgccctg gtggaaataataaagagtcgctcaaatcaacgaaactttcagctcctggtgatcactcac gacgaggactttgtggagctactcagtcgttcacagtacgttgaaagcttctaccgagtc aaaaagaacattgatcagtgttcggaaatcgtgaagtgcagtgtcagctccctcaacacc catggtccatga

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