Rhincodon typus (whale shark): 109927762
Help
Entry
109927762 CDS
T06055
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtp04054
]
109927762 (nlrc5)
Pattern recognition receptors [BR:
rtp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109927762 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
Atypical_Card
CARD
NOD2_WH
LRR_9
AAA
AAA_7
nSTAND3
ParcG
AAA_30
Dark_CARD
Anth_Ig
BcrAD_BadFG
Motif
Other DBs
NCBI-GeneID:
109927762
NCBI-ProteinID:
XP_048461957
LinkDB
All DBs
Position
15:complement(48645916..48964812)
Genome browser
AA seq
1943 aa
AA seq
DB search
MSASGIKEVVESNYGQVVECLSVEAHHALEEAKGILSKKELDLIESKKTNVEKVSVLLNK
LMTKDDETCKKFFETLIIISPNNIFPMCLENLLMTAGDEVLLPQELRESNSNDTAHSDVE
LIATDNSQTGRKRKAAQVANPKSTNVKHVKKGKFCKAREVKSSSIAPFTNTLNSEFQEVD
NLSFQAGEQYLNLPAISDFAEDYKSLMIKNVSEKYEANLAKEDQMKQVIIDQTFRSLTMK
DGNVAKLKERIDASRDDVLSSPGLEENQDTVANLAEFLNKKHVSNCRVHILLGKAGTGKT
KLMHKVCYEWAQGTLSQFQYVFLFEFRQLNLIKNSIDLKSMLFDLFLQPERNSHAVFRFI
IGNPEKILILFDGFDEFVGKAFVHTFAVSSDPMAPLSVGELFSSLYNGKLLPGCTILITS
RPKDVLSLPLDVVSQVGEVSGFDECKIEEYAHRFFKDSKQNHRAICHLQTNRKILNMCYI
PAMCWIVFLCLERLLTPCTVEPKLPHTMTQFYIKMLTVFLSKGTSSKQTSDNIETRLLNK
HREDIHGVCNLAIKGLQASKSVFYLRDLLSEKITNFASSYGFLTTFEVKTIDQYQENGHA
FIHLTLQEFLAALHQMIDSTISDQILKSRFYLKSKWTSKNDMKNEFTDAVHIFLSGLASK
GCKQFLSTLANKSEMWVQRKQRAILQNLRKLATTNLTGPKIIELCHCVYETQDCDLAREV
ATQLKSKFELRNFRLTPADVTVLTFVINSGASCICLDIGGCAMDLECVTILGTCKNIEVL
VFKSRKYEDRFAGTLSEIIPKVSSLKKLILTSCSISVKGITHLSSALKVCHHLEEINLQD
NELGDAGIAALVDVLPQMGSMRKIELGNNNITVDGILGIANTINTCSNILDIHVSDGGNV
AKVRFFTGSTANPINRSLSPSMECEASHETLLRKLSLVNCSLAARHVEALGGILQRCPLL
GCLDLSGNELKDHGLRRLVDILPDFHISKQINLSNNGISEDGVLCLASLLKKCPRMVEVK
VSLKHDQTVLLTFSEQSKDTEVRDELNTQPMEFRLSSTGDSKIKPVPLKKLSLTNCCFQL
KHLEELGCTLENCSDLAELDLSNNSLGDAGVEKFVELLPKLHVSRLINISNNFISLAGVL
CLAGCLNSVRNITEVELSLGKNGKGLIKFHGKCRLQRNKEFQESSLSFETQCGKQDISVP
KKIRLEDWDMDVETMGNLCLILEQCSGLTELELSNNALSAEVITELLNHLSNFCDLKILN
ITDNIILPEAILLLANSLNICENVLKVEVRASGRASIRFKKNVYRLEGNGKKPEPPPSRV
LSLKECNLCKMSVESLFKILKHSKNLTELDLSCNLLGDEGLQYLQNSLPKLQVLKVIDVS
NNRISPVGVLCLVESLHTCSNVTEVEVSLAPPGRSLIKFARRCEKKVCSVKECKFKERDL
FKFFSIIERCTHLMELNVKNKTVSIRLVDSGWQLADYNSTRIDSGAQHPSLQLISLYQCG
IEAPQFLRLAPIIKQCPQLLELHLFQNKIGNKGAEVLADVLPVFRRLKKLSLESIGINSH
GMVTLAACLRKCRSIEDINLSQNELGEEGATELEKILPVLEQLKKINFSGISTAAGLVGT
NRLAMGLSNCTRLEEINLDSLVLSDSGALLLAVGMLRMACLKKLNLRSNSIGYKGAEHLA
RGLKGCPAIVEIDLYGNSIEDVGTMKLADVLPVMKHLKILNLTQNNITATGGERLAQALK
QCPSVEEIHLSRNKIGDQTAKKLSEALPKLPCLKILNLHSTELTADGGESLAQSLALCPS
VEVISLPENSIGNKGVMELAMALQKMTSLKKLDLQLTRFDDSVAEELTAGLAYCPSIEEV
VLSWNDISDEGAVKLAEALPRMLCLKKLDLEGNKITTAGAEKLAASLHQCSFVEVIRLWK
NKISKDREQSLQEQDSRLNFLSV
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagtggaattaaggaagtggtggagagtaactatggtcaagtagtggagtgt
ctcagtgtggaagctcaccatgcccttgaagaggctaagggtatcctcagtaagaaggaa
ctggatcttatcgagagcaaaaaaacgaatgtggaaaaagtttcagtattgctaaacaag
ttgatgaccaaagatgatgagacctgcaagaaattcttcgaaaccctcattatcatttca
cccaataacatattcccaatgtgtctggagaatttgcttatgacagctggagatgaagtt
ttgttgccacaggaactgagagaatctaattccaacgatactgcacactctgatgtagaa
ttaattgcaacagataactctcagactggaagaaagcgaaaagctgcgcaagtggcaaac
ccgaaatctactaatgtaaaacatgtgaaaaaaggtaaattttgcaaagctagagaagta
aaatccagctctatagcccctttcaccaacacattgaactcagagtttcaagaagtggac
aacttgtcatttcaagcaggagagcagtatttgaatttgccagcaatatcagattttgct
gaggattataaatcgttgatgataaagaatgtctctgagaagtatgaagccaacttggca
aaagaagaccaaatgaaacaagtgatcattgatcaaacgtttaggagtctgaccatgaaa
gatggaaatgtggccaaactgaaggagagaattgatgccagccgcgatgatgtactcagt
tcaccagggcttgaagagaatcaggatacagttgcaaacctagcagagttcctgaacaaa
aaacatgtctccaattgtagagtacacatcctacttggaaaagcgggaaccggaaagaca
aagttgatgcacaaagtttgctacgagtgggcacaagggaccctcagtcagttccagtat
gtatttttgtttgagttccgccaactgaatctaatcaaaaacagcatagatctgaagagt
atgttgtttgacttgttccttcagccagaaaggaattcccatgctgtatttagattcatc
ataggaaacccggagaaaattttaattctgttcgatggtttcgatgagtttgtggggaaa
gcctttgtccacacctttgctgtttccagtgaccccatggctccactgtcagtgggagaa
ttattttccagcctgtataatggcaaactgctcccgggctgtacaattctaataacatcc
agaccaaaagacgtcctctccttgcctttagatgttgtgagtcaggtgggagaggtctcg
gggttcgacgaatgtaaaatcgaagagtatgcccatcgatttttcaaagacagtaaacaa
aatcatcgagcaatctgccacttgcagacgaataggaagattttaaacatgtgctacatt
cctgccatgtgctggatagtctttctttgtcttgagcgcttgttaactccatgcactgtc
gaacccaagctacctcatacgatgacacagttctacatcaagatgctcaccgtattttta
agcaaaggcaccagtagtaaacagactagtgataatattgaaacacggctgctaaacaaa
cacagagaagacattcatggagtttgcaaccttgcaataaaagggctccaggcgagtaaa
tctgtgttttatttgagagacctcctttctgaaaagatcacaaactttgcttcctcgtat
ggatttcttaccactttcgaagtgaagacaatagaccagtaccaggagaatggacacgcc
tttattcacttgaccctgcaagagttcctggcagcacttcaccagatgatcgatagcacg
atttctgaccagatactaaaaagcaggttttaccttaagtccaaatggacatcaaagaat
gacatgaaaaatgagttcactgatgccgttcacatatttttatccgggttagcgtcgaag
ggatgtaagcagttcctcagtactttggcaaacaagagtgaaatgtgggtgcaaaggaag
cagagagccattttacagaacttgcgaaagttggctaccacaaatctaactgggccaaaa
ataatcgagttgtgtcactgcgtgtatgagacacaagactgtgatcttgcacgggaagtt
gcaacacagttaaagtccaagtttgagcttcgaaacttcaggcttactccagcagatgtg
actgttctgacgtttgtgataaatagtggagccagctgcatctgcctggatattggaggc
tgtgccatggatctcgaatgtgtcaccattttgggcacttgtaagaacatagaagttcta
gttttcaaaagcagaaagtatgaggacaggtttgctggaacactatctgaaatcattcct
aaagtcagcagcttaaagaagctgatccttacatcctgcagtattagtgtgaagggtatt
acccacttgtcttctgcactgaaagtctgtcatcacttggaagaaataaacttgcaagat
aatgaactcggggatgctggcattgctgcacttgttgacgtgcttcctcaaatgggaagt
atgagaaaaattgaattaggcaacaataatatcactgtagatggcattcttggaatagca
aacaccataaacacctgttcaaatatcctggatatccacgtcagtgatggtgggaatgtt
gcaaaagttagattttttacaggctcgactgccaacccaattaacaggtcattatcaccc
tcgatggaatgtgaagccagtcatgagactctactcaggaagctaagccttgtgaactgc
agcttagcagcacggcatgttgaagcccttggtggaatcctacagcgttgtcccttgctg
ggttgtctggacttgtctggcaatgaactgaaagaccatgggctaagaagacttgttgat
atcctcccagattttcatatctccaaacagattaacctcagcaacaatggcatctcagaa
gatggggttctctgcttggcctcactactgaagaaatgcccccggatggttgaggtcaaa
gtgagcctgaaacatgaccagacagtgttacttacattttcagaacagagcaaggacact
gaagtgagagatgagctgaatacccagccaatggaatttagactgagtagcactggagat
tcaaagatcaagcctgtgccactgaagaaactgagtctgaccaactgttgttttcaacta
aagcatttggaagagttgggctgtacactggagaactgcagtgatctagcagagctggac
ttatcaaataactcacttggagatgcaggagttgaaaagtttgtcgagctcctaccaaag
ctgcatgtttcaagactaatcaacatcagcaataatttcatctcattggctggagttctg
tgcttggctgggtgtctgaacagtgtcagaaacataacagaggtggaactaagcctgggc
aagaatggaaaaggattaattaagttccacgggaaatgcagacttcaaaggaataaagaa
tttcaagaatcatcattgtcgtttgaaacacaatgtggaaaacaggatatatccgtgcca
aaaaaaattagacttgaagattgggatatggatgttgaaaccatgggaaacctctgtttg
atacttgaacagtgttctggacttacagaacttgaattgtcgaataatgcactgagtgct
gaggtcatcacagaactgctgaatcatctatcaaacttttgtgacttgaagattttgaac
attacagataacattattttgccagaggctatccttttgctggctaattctctgaatatt
tgtgaaaatgtgttgaaagtagaagtgagagcgagtgggagagcctcaataagattcaaa
aagaatgtttacagacttgaaggaaatgggaagaaaccagagcctccaccctcacgggtt
ctcagtctgaaagagtgtaacctgtgcaagatgagtgtggaaagtctattcaagattctc
aaacacagcaagaacctgactgagctggacctctcctgcaatttacttggtgatgaagga
ttgcagtatttgcaaaattccttaccaaagctgcaagttttaaaagtaatcgatgtgagc
aacaacagaatctctccagttggtgttctgtgcctggtggaatctctccatacctgcagt
aatgtgacagaggttgaagtgagcttggctccgcctggaagatccctaataaagtttgcg
aggagatgtgaaaagaaagtgtgtagtgtgaaggaatgtaaatttaaagagagagacctg
ttcaaattcttctccattattgaacggtgcacccatctgatggaactgaatgtgaagaac
aaaacagtttccataaggctggttgacagtggttggcaacttgctgattataacagcacc
agaatagactctggagcacagcatccttctctgcaattgatcagtttataccagtgcgga
attgaggctccccaattccttcgtctcgcacccataattaagcagtgtccacaactactg
gagctccatttatttcaaaacaaaatcggcaacaaaggagcggaagtactggctgacgtc
cttcctgtgttccgaagactgaagaagcttagcctcgaatccatcggcatcaactcacat
gggatggtgaccctagcagcatgtctccgcaaatgtcgcagcatcgaagacataaacctg
tcacaaaatgaactgggagaggagggagcaactgaactggagaaaatccttccagtgttg
gaacaactgaagaagatcaacttctctggaatttctacagctgccggtttggtcggaaca
aatagattggccatggggctaagtaactgcacgaggctggaggagataaatttggattcc
ttggtgctgagtgacagcggggcgctgttgttagctgttgggatgctaagaatggcctgt
ctgaagaaattaaatttgaggtcaaactccattggttacaaaggggcagaacatcttgca
agaggactgaaaggctgccctgcgattgtagaaatagacttgtatggtaactccattgaa
gatgtggggacgatgaaacttgccgatgtacttcctgttatgaaacatttgaagatatta
aacttgactcagaacaacatcacagcgaccggtggggagaggctggcacaagctctcaaa
cagtgcccatcagtggaagagattcatttgtccaggaacaagatcggcgatcagactgca
aagaaattgtctgaagccttgccaaagctgccctgtttaaagattctgaacctccattcc
actgaactcactgctgacggaggagaaagcctggcacagagtcttgcgctgtgcccaagt
gttgaagtgataagtttgcctgaaaatagcattgggaacaaaggagtgatggagctcgca
atggctctacaaaaaatgacatctttgaaaaagttggacctgcagctgaccaggtttgac
gacagtgtggcagaggagctcacagctggacttgcgtactgtcccagtattgaagaggtc
gtcttatcctggaatgacatcagtgacgagggtgcagtgaaactggctgaggccctacca
agaatgctatgtttaaagaaactagatttggaagggaacaaaatcacaacagctggagca
gaaaagctagcagcaagtctccaccaatgctcctttgtggaagtgattaggttgtggaag
aacaaaatatccaaggacagggaacagagtcttcaggaacaggattccagattaaatttc
ctctctgtttag
DBGET
integrated database retrieval system
