KEGG   Rhincodon typus (whale shark): 109927862
Entry
109927862         CDS       T06055                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X2
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109927862 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109927862 (rev1)
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    109927862 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C UBM BRCT BRCT_2 POLH-Rev1_HhH LIG3_BRCT PTCB-BRCT DUF7674 IMS_HHH DUF1805
Other DBs
NCBI-GeneID: 109927862
NCBI-ProteinID: XP_020383635
LinkDB
Position
6:51061875..51188198
AA seq 1218 aa
MSRGGWRKRASEGDGWRDWGGYMAAKMDKLERQFKSETSLQQENEGTVSCIFRGVAIFVN
GYTEPTAEELRRLMMLHGGQYHMYYSRSKTTHIIATNLPNSKIKELKEEKVVRPNWITDS
IKAGYLLSYIPYQLYTKQSSVQKGLNFTVSKPEESMPGPSNICKLNRNVKSINNNQDNAK
YKENSNQTNNGMNGCDKKSEDFELTELEHAFPNINHNGVHSCRDHFSLHKRNEPNSYSAL
KKQDYLKHCSETLWEKEIEIPERLEEENDDCEMHFRNCEKQFAEGNALLPDYIRTATASS
LNECFKVNGANHSTVQGIPKTKSSLETSPNKASSHWSTKSADPSFISEFYAHSRLHHIST
WKSEFSEYVNRLQRQSNGIYPGREKLKRINSGTANTVDPSRKQNCIMHVDMDCFFVSVGI
RDHPELKGKPVAVTHNRGHGHMPIRPNTNQQFEMQYYQKKLMKGKIEEKKVPDKLDGSTW
ENPNPACVNGTSVDVMALSMSEIASCSYEARQVGIKNGMFFGQAKQLCPDLQAVSYNFKA
YKEVASILYETLASYTCDIEAVSCDEALVDVTAICAETGLTPDEIATVIRSEIKEKTKCT
ASVGMGSNILLARMATRKAKPDGQYYLKPEEVDDFIRDQLVSNLPGVGRTLENRMASIGV
KTCGELQQVLMPTLQKEFGPKTGQMLYRFCRGLDDRPVRTERERKSVSAEINYGIRFSQT
KEVEVFLFNLAEEIQRRLEMCKMKGKRLTLKVMTRKAGAPTEPAKFGGHGICDSFTRSVT
LDHATSNGKIISREVLHMFHMLKLNVMDLRGVGIQMHHLIPDSKASFAPISSFVQNNSTT
GASCSKMDIFQASRTKKAVQNRLSEDPDGMQKKTAEAGNPVLLPPHRDTNLNGSDISIKA
GGAHTPENAVIHNLQRDVSIEVPSPSQIDPSVLAALPPDIREQVEQTYSAQQQPNSTATH
VKESTKSTVTGQVPVSMGTVILELPGPQEPSNTAGMIVALPAFSQVDPEVFAALPTDVQE
ELRAAYDQRHRQGMKNPLLQLKNTISEKSKKRFKKKNQTSPIKVQSPLKNKLTVSPHKVL
PDLIRHEHQVEENLQVDPGTSISDQQHKVSSQCEISTDVVYLRANLAGAYELKDVKSLLK
EWVTTIGEPVEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLIQQSADSLWNMAFDFIL
DNVQVVMQQIYGSTLKFT
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgagccgtggaggatggaggaaacgtgccagcgaaggggatggctggagagactggggt
ggctacatggcagcaaagatggacaaactagaaaggcaattcaaatcagaaacttctctt
caacaagaaaatgaagggacagtgtcttgtattttcagaggtgttgcaatttttgtcaat
ggttacacagagccaacagctgaggagctgcgaaggcttatgatgctgcatggaggccag
tatcatatgtactattcaaggtctaaaactactcacattattgccactaaccttccaaat
tcaaaaatcaaagaactgaaggaagagaaagttgttcgccccaattggattaccgacagt
ataaaagctggatatctcctatcttacatcccctatcagctctataccaagcagtcaagt
gtccaaaaaggattgaacttcactgtgagcaagcctgaagaatctatgccaggcccgagc
aatatttgtaaacttaatagaaatgtaaagagtatcaataacaaccaagataatgccaaa
tacaaggagaactcaaaccagaccaacaatggaatgaatggatgtgacaaaaaaagtgaa
gactttgagctaacagaattggagcatgcttttcctaatataaatcataatggagttcat
agttgtagagaccatttttcacttcataaaaggaatgagcccaattcttatagtgcctta
aaaaagcaggattatttaaaacattgcagtgaaactttgtgggaaaaggaaattgagatt
cccgaaaggctggaagaagaaaatgatgactgtgaaatgcatttcaggaactgtgagaag
cagtttgcagaaggcaatgctttgctgcctgattatattaggactgctacagcatcttca
ttaaatgagtgctttaaagtaaatggggctaaccactccactgttcaaggaattccaaaa
acgaaaagcagtttggagacttcacccaacaaggcatcttcccattggtctacaaaatcg
gcagatccgagttttatatctgagttttatgcccattcaagactgcatcacatttcaaca
tggaaaagtgaattttcagaatatgtgaacagactgcagagacaaagtaatggcatttac
ccaggcagagaaaaactgaaaaggattaactcaggcacagcaaatactgtagacccatca
agaaaacagaattgtataatgcacgttgatatggactgcttctttgtatcagtgggcatt
cgtgatcatccagaactgaaaggaaagccggtagccgttacccacaacagaggtcatggt
cacatgcctatccgaccaaacactaaccaacagtttgaaatgcagtattaccaaaagaag
ctaatgaaaggcaagatagaagagaaaaaagtgcctgataaattagatggcagtacctgg
gagaatccaaatcctgcctgtgtgaatggtactagcgtggatgtgatggccttgtcaatg
tcagaaattgcatcctgtagctatgaagcaagacaggttggaattaagaatggcatgttt
tttggacaagcaaagcaactgtgccctgatcttcaggctgtcagctataacttcaaagcc
tacaaagaagtggcatcaattttgtatgaaactctggcaagctatacttgtgatattgaa
gctgtcagctgtgatgaagctcttgtagatgtaaccgcaatttgtgctgaaactggattg
acacctgatgagatagcaactgtgattcgctctgagatcaaagagaaaacaaaatgcact
gcatcagttggaatgggatcaaacattctgctggccagaatggccacccgtaaggccaaa
ccagatggacagtattatttaaaaccagaggaagttgatgattttatcagagatcaactt
gtgagcaatctgccaggagttggaaggacattagaaaatagaatggcatccattggtgtt
aaaacctgtggagaactccagcaggttttgatgccaacacttcaaaaggaatttgggcct
aaaacaggccaaatgctttacagattttgccgtggtttagatgataggccagttcgaaca
gagagggagcgcaaatctgtatctgcagagatcaactatggcattcggtttagtcagact
aaagaagttgaggtgtttcttttcaaccttgcagaggagattcaacgacgactggaaatg
tgtaaaatgaaaggaaagcgtctaactcttaaagtaatgacgagaaaagctggtgcacca
acggaaccggctaagtttggtggacatggaatttgtgacagttttaccagaagtgtaaca
ttggaccatgcaacaagcaatggaaaaataatcagcagagaggtactacacatgttccat
atgttgaagctgaatgtgatggatctgagaggggttggaattcagatgcatcatttaatc
ccagactctaaagcttcttttgctcccatttcttcatttgtgcaaaataattcaactact
ggggcttcgtgttcaaagatggacatttttcaggcatcaagaaccaaaaaagctgtgcaa
aacaggctttcagaagacccagatggtatgcagaagaagacggcagaagcaggcaatcct
gttttgcttccacctcatcgagatacaaatctcaatggttcagacatctcaataaaagct
ggtggagcacacacccctgagaatgcagttatccataacctccaacgtgacgttagtatt
gaagtgccatccccttctcagatagatccttctgttttggctgcacttcctccagatatt
agagagcaggtagaacagacatactctgctcaacagcagcctaattctactgctacccat
gtcaaagaatcaacgaaaagcactgttactgggcaagtacctgtgtcaatggggacagtg
attctggaattacctggacctcaggaaccaagcaacactgctggaatgattgtagccctc
ccagctttttcacaggttgaccctgaggtttttgctgccttgcccactgatgtacaagaa
gaactgagagctgcttatgatcaaagacatcggcaaggcatgaagaatccattgcttcag
ttaaagaataccatttctgaaaagtcaaagaaacgtttcaagaaaaagaatcagaccagt
cccattaaagttcagagtcctcttaaaaataagctaacggtcagtccacataaagtgttg
cctgacttgatccgacatgaacaccaagttgaagaaaatctgcaggttgatcctggcact
tccatttctgaccagcaacataaagtgtcctcacagtgtgaaattagcactgatgtagtt
tatttgagagctaaccttgctggagcctatgaattgaaagatgtaaaatcacttctgaaa
gaatgggttacaactattggggagccagtggaagaggacattttgcaggttgtaaagtat
tgcactgatctcattgaagaaaaagatctggaaaagttggacctggttattaagtacatg
aaaaggctaatccagcagtcagcagactccctgtggaacatggcttttgatttcattctt
gacaatgttcaagttgtgatgcagcaaatctatggaagcacgttaaaatttacatga

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