Rhincodon typus (whale shark): 109927910
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Entry
109927910 CDS
T06055
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109927910 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109927910 (capn3a)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
109927910 (capn3a)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C2: calpain family
109927910 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
109927910
NCBI-ProteinID:
XP_048456114
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All DBs
Position
8:complement(77210710..77304809)
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AA seq
713 aa
AA seq
DB search
MPHVINSMQESPPVQTQSKMAGKAALYPIINRNKDITCDKSGVFQHLKDECLRKGVLFED
EEFPANDSSLFYSVGMPFKLEWKRPPEICENPKFIIGGASRTDICQGDLGDCWFLAAIAC
LTLNEKLLYRVIPRDQYFTENYAGIFHFQFWRFGDWVDVTVDDRIPTFNNQLVFTKSAER
NEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKEAPKDLFKILKKATE
RGSLMGCSIDSFVPQQFETRTTSGLIRGHAYSVTSVDEVTYKGQNVKLVRLRNPWGSVEW
NGSWSDKGREWSEIEKTQKQRLQHQMKEDGEFWMSFDDFKRNFTKLEICNLTPDALCDDK
LHRWTVSINEGRWVKGCSAGGCRNYPDTFWTNPQYRLKLCEEDDDPDVAEVLCTFVVALM
QKNRRKERRMGVNFHTIGFAIYEVPKEMQGNKQHLPKDFFLYRASKSRSKSYINLREVSQ
RFSLPPGEYVIVPSTYDPHQEGEFILRVFSEKPNLSEETESQILDDNPKQQTVSTTAQEE
SEEDLQFRCIFEQISGGDMQISASELRNILNRVVKKHKMKTEGFGLESCRSMVALMDTDG
SGKLNLMEFKQLWNKIKKWQAIFKEYDKDNSGMINSYEMRSAVNDAGFRLNSQLYEIISM
RYANEDMNLDFDSFICCLVRLEGMFRTFHAFDKDGDGIIKLSILEWLQLTLYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgtcatcaactcgatgcaggaatcaccaccagtccagacccaatccaaaatg
gctggcaaagctgcattgtatcctatcatcaatcgtaacaaggatattacctgtgacaag
agcggggtctttcagcatctgaaggacgagtgcctgagaaaaggcgtcttgtttgaagac
gaggaattccctgccaatgactcctcacttttttactctgtgggtatgcccttcaagctg
gaatggaaaagacccccagaaatctgtgagaatccaaagttcatcattggcggagcctca
agaactgatatctgtcaaggagatttgggtgattgctggttcctggctgccattgcatgt
ctcactcttaatgagaagctgctgtaccgggttatccctcgtgatcaatactttacagag
aactatgctggaatcttccactttcagttctggcgtttcggtgactgggtggatgtcact
gttgatgaccgaattcccacattcaacaaccagttggtttttaccaaatctgctgagcga
aatgagttttggagtgctctgttggagaaggcctatgccaagttgcatggatcatatgag
gcactgaaaggtggcaataccacagaagccatggaagattttactggtggtgttactgaa
ttctttgagataaaggaagcccccaaggatctgttcaagatcctgaagaaggcaacagag
aggggctcccttatgggctgttcaattgattctttcgtacctcagcagtttgaaacacga
acaaccagcggtttgatcagaggacatgcctattctgtaaccagtgtggatgaagtcact
tacaaaggtcagaatgtgaagttggtgcgtttgaggaatccatggggctcagtggagtgg
aatgggtcctggagtgataagggccgggagtggtccgagattgagaaaacacaaaagcaa
cgacttcagcaccaaatgaaagaagatggagagttctggatgtcttttgatgattttaag
aggaatttcacaaagctggagatttgtaacctgacaccagatgcgctatgcgatgacaag
ctccataggtggacagtatctatcaatgaaggacggtgggtaaaaggctgttcagctggg
ggctgccgtaattatccagacacattctggacgaatcctcagtaccgactgaaactctgc
gaggaggatgatgatcccgatgttgccgaggtcctctgcacctttgttgttgctctaatg
caaaagaatcgtcggaaggaacgcagaatgggtgtcaacttccataccattggatttgct
atttatgaggtgcccaaagagatgcaaggtaataaacaacaccttcccaaagatttcttc
ctctaccgggcatctaagagcaggtctaagtcatatatcaacctacgtgaggtatcacaa
cgtttcagcctccccccaggggagtacgtcattgtcccttccacatacgatcctcaccaa
gaaggagagttcatcctgagggtattctcagaaaaaccgaacctgtcagaggaaactgag
agccagatcttagatgacaaccccaagcagcagactgtgtcaacaacagctcaggaggag
agtgaggaagacctccagttccgctgtatttttgaacagatttctggaggtgacatgcag
atctctgcatcggaactgaggaatatcctaaaccgtgttgttaaaaaacacaaaatgaaa
actgaagggttcggccttgagtcttgtcgtagtatggttgccctcatggatacggatgga
tctggaaagcttaatttgatggagtttaagcagctctggaacaagattaagaagtggcag
gcaatatttaaggaatatgacaaggataattctggcatgattaacagctatgaaatgcgc
tcagctgtgaatgatgcaggtttccgcctgaacagccagctctatgagatcatctccatg
cgctatgccaatgaagatatgaatctggactttgacagcttcatctgttgccttgtgaga
ctggagggaatgttcagaacgtttcatgcctttgataaagatggagatggaatcattaaa
ctcagtattctggagtggttgcaactcaccttatacgcctaa
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