Rhincodon typus (whale shark): 109927916
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Entry
109927916 CDS
T06055
Symbol
wdr21
Name
(RefSeq) WD repeat domain 21 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109927916 (wdr21)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109927916 (wdr21)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
109927916
NCBI-ProteinID:
XP_048455693
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Position
8:81643592..81731497
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AA seq
505 aa
AA seq
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MRRNKWHGSHQYGWHDSQRRHHPRRYRGHNRHTSREWNQRPDPDASESGLNEQNNSAPES
TNSTSVSPDVPELPGFYYDRKKDRYFRLLPGHNNCNPLTWESIRKMEMEEKRLEMLEEDA
KAKQPVVRMGLDLTRLLQKRDSGLMKPASCSRFIQELKVSGMRKNKLDTRSLDSSIQSSF
QMILADTNVERIFAAITDKTGYKYGILNLAGHRRESQLISVDMCDNLYSTHRKGTAACWA
SLSGRDSHVLLCLSGNADVPGCISLLPASIFSNSNSADHLSMLCNFRSSTVWTCAWCFNP
QADKCFSTGLLYRVFVTDAVTGQKQIFNTNSSVLAQQFAHRAPVLYNGCRSGEIFSLDIR
QRMTKALSWAGTIISQNSAVTSIRLLQDENYLMAADMIGKIKLWDLRTTRCVQQYEGHHN
ECAYLPIHPHEEEGILLAVGQDCYTRIWSLHDGTILRTIPSPHSISKDSIPSIVFSSQLG
GRGGVPGLLMAVCHDLYHFPYNSNN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaataaatggcatggcagtcaccagtatggatggcatgatagccaacgacga
catcatccaagaagatatcgaggacataataggcacacatcacgagaatggaaccagaga
cctgatcctgatgcatcagagagtggtttaaatgaacagaataattcggcacctgaatca
actaacagtacttcagtgtctcctgatgtgccagagttacctggattttactatgatcgc
aaaaaggacagatattttaggctgttacctggacataataactgtaaccctcttacttgg
gaatcaatcagaaaaatggaaatggaagaaaaacgattggagatgttggaagaggatgct
aaagctaagcagccagtggttagaatgggtctggatctcaccaggttactacagaaaaga
gattccggattaatgaaaccggcatcatgttcgcgatttattcaagaactcaaggtcagt
gggatgagaaagaataaattggatactcgcagtttggattcttcaattcaaagcagtttc
caaatgattttagcagacacaaacgtggagcgtatatttgctgcaataactgataaaact
ggctacaaatatggaattttaaatctggctggacatcgaagagaatcgcaacttatttct
gtggacatgtgtgacaatctctactccacgcatcgtaaggggactgcagcttgctgggcg
tctctgagtggccgtgattctcatgtcttgctttgtctttctggcaatgcagacgtgcct
ggatgtattagcctacttccagcttcaatcttcagtaactcaaattctgcagatcacctg
agtatgctatgtaactttaggagttcaactgtctggacctgtgcgtggtgcttcaaccca
caagctgataaatgcttcagtacaggtttgttgtaccgtgtctttgtgactgatgccgta
acaggtcaaaaacagatattcaacacaaatagcagtgttcttgctcagcagtttgcacac
agggcccctgtgttgtataatggctgtcgatcgggggagattttcagcctagacatcagg
caacgaatgacaaaagcactgagctgggcaggtacaataatctcccaaaactctgctgtg
acctccatccggctcttgcaggatgaaaattacctcatggctgcagacatgattggaaag
attaaactgtgggacctgaggactacaagatgtgttcaacagtatgagggtcatcataat
gagtgtgcttatctcccaatccatcctcatgaagaagagggtattcttttagctgttgga
caagattgctacactcgaatctggagtctacatgatggtaccatccttcgaacaattcca
tctcctcactctatttccaaggactccatccccagtatagttttctcttcacaattggga
gggagaggtggtgtacctggacttctgatggcagtctgtcatgatctgtatcactttcca
tacaattctaataactga
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