Rhincodon typus (whale shark): 109927921
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Entry
109927921 CDS
T06055
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03015
mRNA surveillance pathway
rtp04261
Adrenergic signaling in cardiomyocytes
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109927921
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109927921
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109927921
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109927921
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109927921
03036 Chromosome and associated proteins [BR:
rtp03036
]
109927921
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109927921
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109927921
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109927921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
TYW3
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109927921
NCBI-ProteinID:
XP_048459852
LinkDB
All DBs
Position
12:complement(11085656..11586738)
Genome browser
AA seq
449 aa
AA seq
DB search
MMPGFGGNANDMQWCFSQVKGTVDEDVSEADIISTVEFNNTGELLATGDKGGRVVIFQRE
QESKNQSHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKT
VKLWKISERDKRPEGYNLKDEDGRIKDPSTITTLRVPVLRPMDLMVEASPRRVFANAHTY
HINSISVNSDYETYMSADDLRINLWHLEITNRSFNIVDIKPANMEELTEVITAAEFHPHQ
CNMFVYSSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR
YMMTRDYLTVKVWDLNMENRPIETYQVHEYLRSKLCSLYENDCIFDKFECVWNGSDSVIM
TGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCMGGKRKKDEISVDSLDFSKK
ILHTAWHPSENIIAVAATNNLYIFQDKVN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggggtttggaggcaatgcaaacgacatgcagtggtgtttctctcaggttaaa
ggaactgttgatgaggatgtgtcagaagccgacataatttctacagtagaattcaacaac
actggagaattgttagcgacaggggacaaggggggtcgagttgtaatatttcagcgagag
caggagagtaaaaaccagtctcatcgcagaggagaatataatgtttacagcactttccag
agccatgaaccggagtttgactacctgaagagtctagagatcgaagagaagataaataaa
atcaggtggctaccccagcagaatgcagcctacttccttctctcaaccaatgataagacg
gttaaactgtggaaaattagcgagcgagacaaaaggccagaaggatacaacttgaaggat
gaagatggtagaatcaaagatccctccacaatcacaaccctacgggtgccggtgctgagg
cccatggatctgatggtggaggccagtcctcgaagggtgtttgccaatgctcacacatat
cacatcaactccatctccgtaaatagtgactatgagacttacatgtcagcagatgacttg
aggataaacctttggcacctggagattaccaaccgaagcttcaatattgtagatataaag
ccagccaacatggaggagctgacagaggtgattacagcagcagaattccatccgcaccag
tgtaacatgtttgtgtatagtagcagtaaaggaacgattcgactgtgtgacatgcgagca
tcggcgctatgtgacaaacactccaaacttttcgaagagccagaggaccccagcaaccgg
tcattcttctccgagatcatttcctccatatcagatgtgaagttcagtcacagcgggaga
tatatgatgacaagggattacctcactgtcaaagtctgggatttaaacatggagaacaga
cccatagaaacatatcaggtgcatgaatatctgaggagtaaactgtgttccctctatgaa
aatgactgcatctttgacaagtttgagtgtgtgtggaatggctctgacagtgtaatcatg
actggttcctacaacaacttcttccgaatgttcgaccgtaacacgaagcgtgacgtcacg
ctggaggcatcgcgggaaaacagcaaacccagagcaatactcaagcctcgcaaagtatgc
atgggtgggaaaaggaagaaagatgaaattagtgttgacagtttggacttcagtaagaag
attctgcacacagcgtggcatccatcagagaatatcatagcagtagccgccacaaacaac
ctctatatattccaggacaaagtgaactag
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